PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf02154g00014.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Nin-like

Protein Properties

Length: 822aa MW: 92848 Da PI: 6.6653

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf02154g00014.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	54.5	2.3e-17	630	677	5	52
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 i+ e l+++F +++ dAAk+L v+ ++LKriCR+y I+RWPh k +++ Peinf101Scf02154g00014.1 630 ITREILEQHFGKTLIDAAKTLRVSRSTLKRICREYDISRWPHHKTRKV 677 8999****************************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF55781	4.71E-5	148	223	IPR029016	GAF domain-like
PROSITE profile	PS51519	12.753	611	697	IPR003035	RWP-RK domain
Pfam	PF02042	4.1E-18	630	677	IPR003035	RWP-RK domain
SuperFamily	SSF54277	9.32E-5	724	762	No hit	No description
Gene3D	G3DSA:3.10.20.240	2.5E-4	726	763	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 822 aa Download sequence Send to blast
MEHLQEGGEF QKPSDVSGLM PCELDWKSKG FFIFDSQWIF WSKRPNHELN YQRMIFPMMV 60 GASVVPSYKG IVKEKIKCIL EKVSSKNVCL IQFWAPIKVN GWTFPSTADQ PFALCIKLDK 120 SLCSYRRLRL DTLIPIDINN AEVEGLLGPP GRVFRRGLPE FCPDVRSYSN AEFPLLEDAI 180 RLGIRRYWAW PVIKPHDQHC LGVLELAFID PTSYSPYLPR FLKEMELRSS EINGLFYPKD 240 IDSQPSELCD KVLALDQIEA GLHVIRRIHS LPFAQIWIPR AQSSSTNVLI ASGKRSYDSW 300 DSICDEFADA SDFCYIQMGK AVVGRAFSSQ GSCFCKDVTL LSLTEYPLIP SARKGRLTKC 360 FALCLRSNCI NFVIEYFLPR NEMVDTDAET FLNMLLSTMK EQLPGVVVSS GEELGQRMLV 420 EVVKVSSCDE LDSFEIGQPR LSVQSLQVRG ETTDTDSLCR QSNLQNGENN VITALLVPSC 480 SSHKNDLFNI EGPGQVDLSL QHPAEAAVTN RQTVNMDVAH DGHIEFEKER GEMMQTDLHF 540 EQPNVETDSA DNARSNDKVE HNDIASCSPV LKPRHRGRTV KLNSLCGRQL VETESINEEC 600 NFLSGAMTNF QRTESLKNKT VPRLEKDYGI TREILEQHFG KTLIDAAKTL RVSRSTLKRI 660 CREYDISRWP HHKTRKVYHH VNHGLSLQGA EPLAGDQQCP VLSQEKGLDS MLHKRSPATG 720 MPCDSLMTVK VTYGGDMIKF QLSPPSTKIE LEEEVEKRLN ISLQSSSKRT TGAAKKLNLS 780 EIKQKEEKVV VNIITDPEKQ GTDQRAESKE QRAASTTQRD QL

Sequence ? help Back to Top

Protein Sequence Length: 822 aa Download sequence Send to blast

MEHLQEGGEF QKPSDVSGLM PCELDWKSKG FFIFDSQWIF WSKRPNHELN YQRMIFPMMV  60
GASVVPSYKG IVKEKIKCIL EKVSSKNVCL IQFWAPIKVN GWTFPSTADQ PFALCIKLDK  120
SLCSYRRLRL DTLIPIDINN AEVEGLLGPP GRVFRRGLPE FCPDVRSYSN AEFPLLEDAI  180
RLGIRRYWAW PVIKPHDQHC LGVLELAFID PTSYSPYLPR FLKEMELRSS EINGLFYPKD  240
IDSQPSELCD KVLALDQIEA GLHVIRRIHS LPFAQIWIPR AQSSSTNVLI ASGKRSYDSW  300
DSICDEFADA SDFCYIQMGK AVVGRAFSSQ GSCFCKDVTL LSLTEYPLIP SARKGRLTKC  360
FALCLRSNCI NFVIEYFLPR NEMVDTDAET FLNMLLSTMK EQLPGVVVSS GEELGQRMLV  420
EVVKVSSCDE LDSFEIGQPR LSVQSLQVRG ETTDTDSLCR QSNLQNGENN VITALLVPSC  480
SSHKNDLFNI EGPGQVDLSL QHPAEAAVTN RQTVNMDVAH DGHIEFEKER GEMMQTDLHF  540
EQPNVETDSA DNARSNDKVE HNDIASCSPV LKPRHRGRTV KLNSLCGRQL VETESINEEC  600
NFLSGAMTNF QRTESLKNKT VPRLEKDYGI TREILEQHFG KTLIDAAKTL RVSRSTLKRI  660
CREYDISRWP HHKTRKVYHH VNHGLSLQGA EPLAGDQQCP VLSQEKGLDS MLHKRSPATG  720
MPCDSLMTVK VTYGGDMIKF QLSPPSTKIE LEEEVEKRLN ISLQSSSKRT TGAAKKLNLS  780
EIKQKEEKVV VNIITDPEKQ GTDQRAESKE QRAASTTQRD QL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006354235.1	0.0	PREDICTED: protein NLP6-like isoform X1
TrEMBL	M1B291	0.0	M1B291_SOLTU; Uncharacterized protein
STRING	PGSC0003DMT400035438	0.0	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA10406	5	15

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	3e-52	NIN like protein 7