PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf02085g03002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | ERF | ||||||||
Protein Properties | Length: 254aa MW: 28457.8 Da PI: 5.0589 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.5 | 5.8e-17 | 71 | 120 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr + +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a+ +++g Peinf101Scf02085g03002.1 71 VYHGVRKRT-WGKWVSEIREPRK---KSRIWLGTFATAEMAARAHDVAAIAIKG 120 69****887.**********843...6**********************99887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 3.4E-31 | 70 | 129 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.9E-21 | 71 | 129 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 2.1E-11 | 71 | 120 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.1E-34 | 71 | 134 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.734 | 71 | 128 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.7E-10 | 72 | 83 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.17E-32 | 72 | 130 | No hit | No description |
PRINTS | PR00367 | 5.7E-10 | 94 | 110 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence Send to blast |
MAEETLIFNN TDNPKPSNFT TSSTSTPCSP LTKRPNLEAD KQETKKKTKY SDIECDSHNM 60 NKKIDDLKHR VYHGVRKRTW GKWVSEIREP RKKSRIWLGT FATAEMAARA HDVAAIAIKG 120 RLAVLNFPEL AHLFPKPAST CAKDIQSAAA KAAALDIPSI SCISEQSQGE LIEETEDSIR 180 ESSSSTSSLR SNEDPFLDLP DLLLDLSQQI DKCCDYNSPI WELAGAESND SSHSEFWPQD 240 LYLWDYSYGI VLDA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 2e-17 | 69 | 128 | 12 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016432455.1 | 5e-95 | PREDICTED: ethylene-responsive transcription factor ERF038-like | ||||
Swissprot | Q8LBQ7 | 5e-42 | ERF34_ARATH; Ethylene-responsive transcription factor ERF034 | ||||
TrEMBL | A0A1S3WXP5 | 1e-93 | A0A1S3WXP5_TOBAC; ethylene-responsive transcription factor ERF038-like | ||||
STRING | XP_009610624.1 | 2e-93 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA212 | 24 | 225 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 3e-32 | ERF family protein |
Publications ? help Back to Top | |||
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