PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02016g05052.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 321aa    MW: 35904.2 Da    PI: 5.1225
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02016g05052.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.49.3e-12149195455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                h + Er+RR+++ + f  L +++P +     kKl+Ka+ L  +++Y+k+Lq
  Peinf101Scf02016g05052.1 149 DHAILERKRRQKMTQLFVSLSKVIPGL-----KKLDKASLLGDTIQYMKELQ 195
                               5999***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.773145194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-9150195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.00E-10150199No hitNo description
Gene3DG3DSA:4.10.280.101.4E-15150208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-15150207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.6E-12151200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MSNHGMDYKG FSHQESMESF DDFILEDDLF LNPNPILSEI YSTAPYNFNS TSNFSYNYTS  60
KENEQKSLIM TSPPSSSSSS SSEVLISFST PSATSVKTSQ RDLVEKAYSL DSLTYHMMSH  120
VSEENSNNAC QESSGNNNMY KRDSSQAGDH AILERKRRQK MTQLFVSLSK VIPGLKKLDK  180
ASLLGDTIQY MKELQQRVKV LEEEIENNTS KKASACGRVK DVTSLSKKSD YGSNEEVVAE  240
INVRVFGKSA LINIYCNKQS GVVGRILSEM ETLHLSIRDI NIMSFGPTSL DISIVAEMEN  300
YGTCENVEDI VKDLQSKLRP C
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153158ERKRRQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019244654.11e-112PREDICTED: transcription factor bHLH25-like
TrEMBLA0A1J6JBH11e-110A0A1J6JBH1_NICAT; Transcription factor bhlh25
STRINGXP_009606580.11e-107(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1623655
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-37bHLH family protein