PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01969g06037.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 305aa    MW: 32648.7 Da    PI: 4.3692
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01969g06037.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.77.4e-101443130
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIart 30
                              +g+WT+eEd++l+ +++++G g+W++ +++
  Peinf101Scf01969g06037.1 14 KGPWTPEEDQKLLAYIEEHGHGSWRALPAK 43
                              79**********************998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.3E-13561IPR009057Homeodomain-like
PROSITE profilePS5129412.596965IPR017930Myb domain
SuperFamilySSF466897.18E-91149IPR009057Homeodomain-like
SMARTSM007173.9E-51363IPR001005SANT/Myb domain
PfamPF002492.3E-81442IPR001005SANT/Myb domain
CDDcd001674.21E-61656No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MGRSPCCDKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAAEARLV RQSKLRSNSF  60
QNPLASQELF TAPTPSSPLH KPIVTPTKAP GSPRCLDVLK AWNGVWTKPM NDGLHADGST  120
SATVSVNALG LDLESPTSTL SYFENAQHIS NGMIQENSTS LFEFVGNSSG SSEGGIMNEE  180
SEEDWKGFGN SSTGHLPEYK DGINENSMSL TSTLQDLTMP MDTTWTAESL RSNAEDISHG  240
NNFVETFTDL LLSTSGDGGL SGNGTDSDNG GGSGNDPSET CGDNKNYWNS IFNLVNSSPS  300
DSAMF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankZ139960.0Z13996.1 P.hybrida myb.Ph3 gene encoding protein 1.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016493290.11e-113PREDICTED: transcription factor MYB35-like
TrEMBLQ029921e-172Q02992_PETHY; Protein 1
STRINGXP_009624863.11e-106(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.24e-27myb domain protein 16