PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01945g01005.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

HD-ZIP

Protein Properties

Length: 610aa MW: 69585.9 Da PI: 4.6422

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01945g01005.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	48.8	1.2e-15	75	125	6	56
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++t++q+e LeelF++n +p ++ r + +k lgL+ +q++ WFqN++ + k Peinf101Scf01945g01005.1 75 RHTPQQIELLEELFKQNANPPTQLRIQWSKDLGLDPKQIRSWFQNKKSRIK 125 579********************************************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.0E-12	65	126	IPR009057	Homeodomain-like
SMART	SM00389	3.9E-12	69	131	IPR001356	Homeobox domain
CDD	cd00086	4.30E-12	75	125	No hit	No description
Pfam	PF00046	5.0E-13	75	125	IPR001356	Homeobox domain
Gene3D	G3DSA:1.10.10.60	1.0E-12	75	134	IPR009057	Homeodomain-like
PROSITE profile	PS50071	13.507	77	127	IPR001356	Homeobox domain
PROSITE profile	PS50848	26.343	234	483	IPR002913	START domain
SuperFamily	SSF55961	2.75E-18	235	434	No hit	No description
SMART	SM00234	0.0027	243	468	IPR002913	START domain
Pfam	PF01852	5.8E-20	243	437	IPR002913	START domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding
GO:0008289	Molecular Function	lipid binding

Sequence ? help Back to Top
Protein Sequence Length: 610 aa Download sequence Send to blast
MDPINEGNNS EPNNEEKSKN DQAVEIGNEG NINIGTNDEQ SQNNNQAIDK GNGESGSIEE 60 YAEGTSSSHH ASAIRHTPQQ IELLEELFKQ NANPPTQLRI QWSKDLGLDP KQIRSWFQNK 120 KSRIKGAKKK EENNVLRVEN DQYIEENQQL KEVVDKLLCP DCRGQALEDI KEENARLQEE 180 LERVSKFVDL VMDDPLRPMH QAQEPRRDDE QHENALDLEL RLETPKFERV KKIEDWEKPI 240 MIEIAKTAME ELKILLTHDD PLWVKFPWDE KYVLDGTAYD ELFTREIKFK GSNAWIESSK 300 VSIEVAMPAA QLVGKLMGSD EWKNYFPTII NKASTLEVID NIDNETEGAG PLKLVFEETH 360 SLSPLADSRK YIMLRYCEKS EPNCTFIVDV SYDYLREVQD ASDSQYWRHP SGCMVQDIGD 420 GKSKVIRIEH VEIEDNSEAQ LAVTHNGGNI ATLSYRMIKN FVTMLTMSNL LQTLQSQEHD 480 YESNQIQPFT RKNDSAGQPA GMIISGVTSL WLPKSKDDLY HFFNDENNRA KWDMLFKYRT 540 GDEILSYSMM RMNHALDLAE KSGANIGSAE KRIGPITCSM HSIQVNQGAS GTLPNGIPTY 600 TVVIENIVQR

Sequence ? help Back to Top

Protein Sequence Length: 610 aa Download sequence Send to blast

MDPINEGNNS EPNNEEKSKN DQAVEIGNEG NINIGTNDEQ SQNNNQAIDK GNGESGSIEE  60
YAEGTSSSHH ASAIRHTPQQ IELLEELFKQ NANPPTQLRI QWSKDLGLDP KQIRSWFQNK  120
KSRIKGAKKK EENNVLRVEN DQYIEENQQL KEVVDKLLCP DCRGQALEDI KEENARLQEE  180
LERVSKFVDL VMDDPLRPMH QAQEPRRDDE QHENALDLEL RLETPKFERV KKIEDWEKPI  240
MIEIAKTAME ELKILLTHDD PLWVKFPWDE KYVLDGTAYD ELFTREIKFK GSNAWIESSK  300
VSIEVAMPAA QLVGKLMGSD EWKNYFPTII NKASTLEVID NIDNETEGAG PLKLVFEETH  360
SLSPLADSRK YIMLRYCEKS EPNCTFIVDV SYDYLREVQD ASDSQYWRHP SGCMVQDIGD  420
GKSKVIRIEH VEIEDNSEAQ LAVTHNGGNI ATLSYRMIKN FVTMLTMSNL LQTLQSQEHD  480
YESNQIQPFT RKNDSAGQPA GMIISGVTSL WLPKSKDDLY HFFNDENNRA KWDMLFKYRT  540
GDEILSYSMM RMNHALDLAE KSGANIGSAE KRIGPITCSM HSIQVNQGAS GTLPNGIPTY  600
TVVIENIVQR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03260.1	2e-73	homeodomain GLABROUS 8