PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01853g05022.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 206aa    MW: 22699.6 Da    PI: 10.3639
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01853g05022.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.76.4e-14120164347
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                               +WT+eE++ ++ + ++lG+g+W+ I+r + ++Rt+ q+ s+ qky
  Peinf101Scf01853g05022.1 120 PWTEEEHKNFLIGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKY 164
                               8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129419.316113169IPR017930Myb domain
SuperFamilySSF466896.65E-18115170IPR009057Homeodomain-like
TIGRFAMsTIGR015572.4E-18116168IPR006447Myb domain, plants
SMARTSM007171.5E-9117167IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.2E-11117163IPR009057Homeodomain-like
PfamPF002491.7E-11120164IPR001005SANT/Myb domain
CDDcd001674.27E-9120165No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MGRKCSHCGY IGHNSRTCNT FKAGASASTA SFIGGLRLFG VQLDITSSSN NSSIHLKKSF  60
SLDCLSSTHV SPHSSSPSPS SSLSSSRLSA NESCEKSTSV NGYLSDGLVG RVEERKKGVP  120
WTEEEHKNFL IGLEKLGKGD WRGISRNFVT TRTPTQVASH AQKYFLRQSS FNKKKRRSSL  180
FDMVINILDF LSTSSLFQLR ILSYYP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1172176KKKRR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00565DAPTransfer from AT5G56840Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016491815.13e-85PREDICTED: myb-like protein J
TrEMBLA0A1S4BSF46e-84A0A1S4BSF4_TOBAC; myb-like protein J
STRINGXP_009590196.11e-83(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33852147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.11e-57MYB_related family protein