PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01844g01018.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family BES1
Protein Properties Length: 696aa    MW: 78154.7 Da    PI: 5.5055
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01844g01018.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822142.92.9e-44702101131
                    DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagss 85 
                               ggs+r ++ +E+E++k+RER+RRai+aki+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++  s+p+ + +++g+s
  Peinf101Scf01844g01018.1  70 GGSRRCRPVEEKERTKLRERQRRAITAKILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSHPQGTGATGGTS 154
                               6899******************************************************************999999999999999 PP

                    DUF822  86 asaspesslq.sslks.........salaspvesysaspksssfpspssldsisla 131
                               +++ ++ss++  + ++         s ++  +++++++ ks+ +p +s +d+ s+a
  Peinf101Scf01844g01018.1 155 STMATSSSSHiPKQHNppaslkcmpSGFQNTADHSACQVKSVFVPTSSPYDTSSSA 210
                               99888888763322221111111224566666666677777777777777666554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.7E-3871204IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514451.2E-177253690IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.801.8E-194256690IPR013781Glycoside hydrolase, catalytic domain
PfamPF013731.7E-103262682IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.1E-67293307IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.1E-67314332IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.1E-67336357IPR001554Glycoside hydrolase, family 14
PRINTSPR008425.6E-8419428IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007502.1E-67429451IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.1E-67502521IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.1E-67536552IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.1E-67553564IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.1E-67571594IPR001554Glycoside hydrolase, family 14
PRINTSPR008425.6E-8574584IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007502.1E-67611633IPR001554Glycoside hydrolase, family 14
PRINTSPR008425.6E-8662676IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR008425.6E-8677691IPR001371Glycoside hydrolase, family 14B, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 696 aa     Download sequence    Send to blast
MASEMQRYDT NEDDEEMGMD VKEEDDEDDD DEEKNASMHA MEGFDGVHGS SSNNRFQHLQ  60
QYQEQQTPQG GSRRCRPVEE KERTKLRERQ RRAITAKILA GLRRHGNYNL RVRADINDVI  120
AALAREAGWV VLPDGTTFPS RSHPQGTGAT GGTSSTMATS SSSHIPKQHN PPASLKCMPS  180
GFQNTADHSA CQVKSVFVPT SSPYDTSSSA PSQTSVMVAD GRDTQNDPFL VGSVDSIDKQ  240
VVDIRTKLHE RDFAGTPYIP IYVMLPLGVV NMKSELVDAD GLVKQLRVLK SINVDGVMVD  300
CWWGIVEANV PQEYNWNGYK RLFQVVREHK LKIKVVMSFH ECGGNIGDDV CIPLPHWVSE  360
IGRSNPDIYF TDRAGRRNPE CLSWGIDKER VLRGRTAVEV YFDYMRSFRV EFDEFFDDGI  420
ISMVEVGLGP CGELRYPSNP VKHGWRYPGV GEFQCYDQYM LKGLRKAAEA RGHSCWARGP  480
DNAGSYNSRP QETGFFCDGG DYDGYYGRFF LNWYSQVLVD HADRVLSLAK LAFEGTCIAA  540
KLSGIHWWYK TSSHAAELTA GFYNPSNRDG YVAIAAMLKQ HGAALNFKFA EMSMLEQAVD  600
FAEALGDPEG LAWQVLNASW DISLPVCSEN ALLCHDRGGY NCLLEKAKPL NDPDGRHIFA  660
FTYLRLGPLL MDSQNFMEFE RFVKRMHGEA VLEFQS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1bfn_A1e-14725868911444BETA-AMYLASE
1bya_A1e-14725868911444BETA-AMYLASE
1byb_A1e-14725868911444BETA-AMYLASE
1byc_A1e-14725868911444BETA-AMYLASE
1byd_A1e-14725868911444BETA-AMYLASE
1q6c_A1e-14725868911444beta-amylase
1wdp_A1e-14725868911444Beta-amylase
1wdr_A1e-14725868911444Beta-amylase
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754401e-167HG975440.1 Solanum pennellii chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015059070.10.0beta-amylase 7 isoform X3
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLA0A3Q7EKY00.0A0A3Q7EKY0_SOLLC; Beta-amylase
STRINGSolyc01g094580.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16072448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]