PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01784g02023.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB
Protein Properties Length: 1557aa    MW: 169584 Da    PI: 6.6765
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01784g02023.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.81e-07774815346
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
           Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                               +WT  E e++++  + +G++ +++Ia+ +  ++t  +c+++++k
  Peinf101Scf01784g02023.1 774 PWTSVEREIFIEKLATFGKD-FRKIASFLD-HKTTADCIEFYYK 815
                               8*****************99.*********.***********98 PP
2Myb_DNA-binding30.11.1e-09896936345
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
           Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                                WT eE  ++++av  +G++ +  I+r++  +R++ qck ++ 
  Peinf101Scf01784g02023.1 896 DWTDEEKSIFIQAVSAYGKD-FVMISRCVR-TRSRDQCKIFFS 936
                               5*****************99.*********.********8775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.72E-13757818IPR009057Homeodomain-like
PROSITE profilePS5129314.617770821IPR017884SANT domain
SMARTSM007171.8E-8771819IPR001005SANT/Myb domain
PfamPF002491.4E-5774815IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.2E-4774815IPR009057Homeodomain-like
PROSITE profilePS5129311.574892943IPR017884SANT domain
SMARTSM007171.2E-8893941IPR001005SANT/Myb domain
SuperFamilySSF466891.17E-10894943IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-5896937IPR009057Homeodomain-like
PfamPF002495.6E-7896935IPR001005SANT/Myb domain
CDDcd001678.09E-7897935No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1557 aa     Download sequence    Send to blast
MPSEPLPWDR KDRKHDVLAA GHGKQGGWHM YPEESGHGFM PSTRLNEKMI VEDDNCRQSR  60
GDGGKYGRSS SCSRENRSFG QRDWRGGSHS SPSGPARQND VTNDQRSGDG VVTHNSEYIN  120
GWDQSHHSRD QLNKSGSVNG VAASTGQRVD RENSLGSVEW RPLKWTRSGS LSSRGSLSHS  180
GSSKSMGVDS NETKPELQPG NSKPVQSLNG DANACVTSAA PSEETTSRKK PRLGWGEGLA  240
KYEKKKVGPE DCAVKAGASI SGDSVEAGHS HPLNLADKSP RVAAFLDCPS PATPSSVACS  300
SSPGLEDKQL VKATNNDQDV GNLSASPSVV SQYHSEGLAF NLESFDLAQI SNLNSSINEL  360
LQSEDPSSVD SGFMRTTAVN KLLLWKSDIT KALEKTEAEI DSLENELKTL ISEPKNTQVV  420
PSASCSPPKE CNSVSHEDQG TTSNIASRPR PLQVVIPDDV TGEEGANIQD NEHTEMKVED  480
IDSPGSATSK FVELPSEKDV APVDAMKPDL GMLISDDNKC RSFDVKACSF IEEKAKCRSS  540
DGKACGVSEE KSRDTLACGL GSQTTVSCSL SVCDGSLSCG EDALYNLILA ANKDSAHRAF  600
EVFENLLPAG ECTFDFPRDV SVSSLPIDPA VKERFARRKQ FQKFKEKIIA LKFRVHQHLW  660
KEDMLSVRKF RARSQKKFDL SPRPVQIGHQ KQRSTVRSRF STAVGNLSPV PSSEILNFAS  720
RLLSDIGAKV YRNTLRMPAL ILDQKEKTMS RFISKNSLVE DPCAVEKERF LINPWTSVER  780
EIFIEKLATF GKDFRKIASF LDHKTTADCI EFYYKNHKSD CFERTKKKPD YSKQAKVCSA  840
NTYLVASSGK RWNRNQEWKH QKVGSSTRFP RTPEVAQSID DETCSDESCG EMDPTDWTDE  900
EKSIFIQAVS AYGKDFVMIS RCVRTRSRDQ CKIFFSKARK CLGLDKILPG PGNLARQDVN  960
GGSDPDACVI ETELLCNEKS SLKLEEVNEF CVKGGISKPD TTSSDDKDGA GELDSVDTEP  1020
VSKNSVQVNC RVDKQEVEVN RECEIQTGAC TGNGRGHDNI VRVSLEGVQI DGHASENGLP  1080
DIVRANKVSA KHLGEEINGV VSLPQHGLKG IKAEMAEVSR SNCSLEDMKP NMVPSESISH  1140
LAAARGELCP LNGSQNMTVL ESDSKYKSDV NYSVSNISVQ RKQIHQASNA DNSLDLGLEN  1200
VDNATQSPEQ SLPSTSRLAH VESCQVRGSY SLGETAPKES GDSGSSTSTA LRDIKNVVRN  1260
LHSDTFSTTS CFLQKCNGIN RSGSGSDLPI PNREPMGGSS SKVEKPCRNG DVKLFGQILS  1320
KPCSQQSASS NLQQSNGNIQ QLKVCSNSLG ASHSLDGNPA STAKFERNNF LSSENHPVRS  1380
FGFWDGNRIQ TGFSALPDSA ILLAKYPAAF GNYALSSSKM EQSALHGVVK TTERNLNGVP  1440
VFPARDASSN NGVAADYQVY SNREVQPFTI EMKQRQEAVF SEMQRRNGFD VVSGMQQQAR  1500
GVVVGRGGGI LVGGQCTGVV SDPVAAIKMH YAKAEQFSGQ ASIIREDDSW RSKGDIS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009803598.10.0PREDICTED: uncharacterized protein LOC104248943
RefseqXP_016486022.10.0PREDICTED: uncharacterized protein LOC107806392
TrEMBLA0A1S4BAX10.0A0A1S4BAX1_TOBAC; uncharacterized protein LOC107806392
TrEMBLA0A1U7YKF20.0A0A1U7YKF2_NICSY; uncharacterized protein LOC104248943
STRINGSolyc04g049120.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59042332
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52250.11e-116MYB family protein