PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01631g01032.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 427aa    MW: 48134 Da    PI: 6.7107
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01631g01032.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.35.6e-05361383123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               ++Cp+C+++F++   L  H r+H
  Peinf101Scf01631g01032.1 361 HECPYCDRVFKSGQALGGHKRSH 383
                               79******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM0035512122IPR015880Zinc finger, C2H2-like
SuperFamilySSF576671.96E-7122No hitNo description
PROSITE profilePS5015710.055127IPR007087Zinc finger, C2H2
PROSITE patternPS000280222IPR007087Zinc finger, C2H2
PfamPF139122.1E-7224IPR007087Zinc finger, C2H2
SuperFamilySSF576671.96E-7276303No hitNo description
SMARTSM0035511281303IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.808281308IPR007087Zinc finger, C2H2
PfamPF139124.7E-7281305IPR007087Zinc finger, C2H2
PROSITE patternPS000280283303IPR007087Zinc finger, C2H2
SuperFamilySSF576679.92E-5359384No hitNo description
SMARTSM003550.012361383IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.619361383IPR007087Zinc finger, C2H2
PfamPF139121.1E-11361383IPR007087Zinc finger, C2H2
PROSITE patternPS000280363383IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
MCQQCGKVFQ SLKALCGHMA CHSEKDKGVL IDSNSDSEAE EEELRLRTRS KTKSTVNNSS  60
SSVSEIDEQE QEEVAKSLMK LSRDSRIWNC VTSVDESSDN NSVVLETKSS STDMRFGRKD  120
SLKHVYNQDE MPRTKNKEDR NLKLSVSDAE AQSESSDSAY FLEENAIVES DVSVDGFGIN  180
RNSKWITSKM SNAAWCDESR THKEKGLNRN KRNTTDSSKD ITEECEDDDY WLSSYEDKCE  240
PGKRIRDSSY HPELGNKSYK KMKLGHNGSD GCKNIHNKKK YECLNCKKIF GSYQALGGHR  300
PCHKKANSYV ESVNGTGENS LDADHDGDHR ETFNSRKPAS AVKELSYNPE KKIKPKKVKG  360
HECPYCDRVF KSGQALGGHK RSHFIGGSFR NPNQSSAAKK EVDDLLDLNL PAPIDDEENE  420
HAHFVSW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0036720.0AB003672.1 Petunia hybrida mRNA for ZPT4-3, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016546658.10.0PREDICTED: uncharacterized protein LOC107846898
TrEMBLP937190.0P93719_PETHY; ZPT4-3
STRINGPGSC0003DMT4000727960.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13432255
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.16e-20C2H2-like zinc finger protein