PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01556g06005.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 457aa    MW: 50423.6 Da    PI: 7.3438
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01556g06005.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.61.7e-16234280455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                hn+ ErrRRdriN+++  L++l+P+a      K +Ka++Le++++Y+k+Lq
  Peinf101Scf01556g06005.1 234 VHNQSERRRRDRINQKMKALQRLVPNA-----SKTDKASMLEEVINYLKQLQ 280
                               6*************************9.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.106.4E-18228291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.777230279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.23E-19233302IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.1E-14234280IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.51E-16235284No hitNo description
SMARTSM003531.2E-16236285IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    Send to blast
MSHCTVPTWN QRQEQVVEAQ EAANKYLHVH NQQNQINHFV PMSNCEAVAE LTWENGQLAM  60
HGLGGILSNS HTKPTLGRTA DTLESIVHQA THHGQNQFLM QDEANIGMFC GGKWGESSLQ  120
MAEEATVLAK KRMRSDTDPQ YGGKSVEVFS TPTKNENYEY AERSACASAS ATFCRENDTT  180
MVSWPSFDES SRSVKSKTTC DDDSACHDGA SENKEEKHET KGSNSSRRNR AAVVHNQSER  240
RRRDRINQKM KALQRLVPNA SKTDKASMLE EVINYLKQLQ AQIQMMSSTT ARNMAPQMMM  300
PLGMHQHIQM SLQLARMGMG VGLGMGMGML DMTAFARAAA ATTPHQSLST HPGLIHHPNP  360
MATPTANPFM PTAFTMPAAP AIPSATQATV DRATTVTPVT STTNNSVHLT DPYSSFLPRS  420
MDMEFFNNMA ALYRQQANES AQTTGSKLNH GNLSQRE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1238243ERRRRD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009630766.10.0PREDICTED: transcription factor UNE10-like isoform X2
TrEMBLA0A1S3ZJY00.0A0A1S3ZJY0_TOBAC; transcription factor UNE10-like isoform X2
STRINGXP_009630765.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA54371732
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.17e-39bHLH family protein