PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01556g05010.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 524aa    MW: 59063.1 Da    PI: 4.495
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01556g05010.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.61.4e-08262309347
                               SS-HHHHHHHHHHH....HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   3 rWTteEdellvdav....kqlGggtWktIartmgkgRtlkqcksrwqky 47 
                               +W++eE+el+ ++v    + lG++ W+  a +++  Rt+k+++s+++++
  Peinf101Scf01556g05010.1 262 KWSEEEEELFHEVVfsnpASLGKNFWNHLAIEFP-SRTRKELVSYYFNV 309
                               8*************4444455666**********.***********996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007174.1E-5259312IPR001005SANT/Myb domain
SuperFamilySSF466895.69E-5259310IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.8E-5259321IPR009057Homeodomain-like
PfamPF002494.6E-7262309IPR001005SANT/Myb domain
PROSITE profilePS500906.202262310IPR017877Myb-like domain
CDDcd001679.56E-4262310No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    Send to blast
MAQKRPFGEE ELYEVSSKQP RHAEPSCQLV SVLECSRESV APKAYASGGD EENFSRIKPD  60
ADNKPDSHNV AKAYFPFEKE TEMDIHGSAS NSSWPTSSTS EEDIRSEAPF HVLVSPEYYC  120
FDHSFRTVAH PREIYSSLLS DPRKMVPIGP DFQADLPEWG AYGNMNKANL DGVHKTLSLS  180
SQADENKLAG TCIVPMPKME LVADHGKNIG AGRAECSCED VGSIRCVRLH IMEARERLNL  240
ALGEETFVRL GFYEMGELIA EKWSEEEEEL FHEVVFSNPA SLGKNFWNHL AIEFPSRTRK  300
ELVSYYFNVF MLRKRSKQNR FDPLNIDSDD DEWQEIVDSA DERAKTTDED EDSVIESPAY  360
HNNLGYNGVY EEHDKQMCYE DASAATWDDC MPVNFSSRKI FTDVPESCLS KFFDRNNSYK  420
HSMQPQDQGV PDEVAEQEVQ DSSHTTDAVR VTSESSLGKT DNNGKHWASD LAGMRGASEH  480
HSEWDAGYLS CAKNEVELLP TRTMIEEVFG DGAWIYKRGG PGLG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019240434.10.0PREDICTED: uncharacterized protein LOC109220416
RefseqXP_019240435.10.0PREDICTED: uncharacterized protein LOC109220416
TrEMBLA0A1J6KM240.0A0A1J6KM24_NICAT; At-rich interactive domain-containing protein 2
STRINGXP_009623741.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15141625