PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01550g02016.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 301aa    MW: 34341.8 Da    PI: 6.9227
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01550g02016.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.72.7e-13134178347
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                               +WT+ E++l++ + +++G+g+Wk+I+r+    +t+ q+ s+ qky
  Peinf101Scf01550g02016.1 134 PWTEGEHQLFLMGLNKYGKGDWKSISRYYVVSKTPTQIASHAQKY 178
                               7*****************************99************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512936.1123287IPR017884SANT domain
SMARTSM007170.563385IPR001005SANT/Myb domain
SuperFamilySSF466895.23E-73585IPR009057Homeodomain-like
PROSITE profilePS5129416.986126183IPR017930Myb domain
SuperFamilySSF466892.09E-15129183IPR009057Homeodomain-like
SMARTSM007171.4E-9131181IPR001005SANT/Myb domain
TIGRFAMsTIGR015575.9E-17132181IPR006447Myb domain, plants
CDDcd001673.07E-9134179No hitNo description
PfamPF002495.8E-11134178IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.9E-9134179IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MDWPEFLESS NSQESTFDLF SAPHITYGVV HEQADQWTLE EYQIFENALS HFNSNSPSFF  60
EYVSSNLPHK SLEDINNYYL ALLKEKAVAA ADHDDYDQLP QEEDSSCMEN VEASMNGTQT  120
QDEKKGPRRR RGIPWTEGEH QLFLMGLNKY GKGDWKSISR YYVVSKTPTQ IASHAQKYFS  180
RRNSTTPLGR RRPSINDIQT VTLKPRTTTV TSQIKNSRLA NYNTNQGSSV PNFQYSYNFG  240
SMSSIHGDFG RFNRAEASSS SINMVQQTIN GNTINLHRPV SPRPFLSMYL SSHDPRNNHG  300
V
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009784767.11e-119PREDICTED: transcription factor DIVARICATA-like
TrEMBLA0A1U7WXW81e-118A0A1U7WXW8_NICSY; transcription factor DIVARICATA-like
STRINGXP_009784767.11e-119(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52342032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.13e-33MYB family protein