PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01468g08062.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Nin-like
Protein Properties Length: 938aa    MW: 104334 Da    PI: 6.8411
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01468g08062.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK91.66.1e-29618668252
                    RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                               ek+isl++l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++
  Peinf101Scf01468g08062.1 618 EKSISLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 668
                               799**********************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.450.405.2E-4213299IPR029016GAF domain-like
PROSITE profilePS5151917.359607688IPR003035RWP-RK domain
PfamPF020421.1E-24621668IPR003035RWP-RK domain
SuperFamilySSF542778.41E-21832926No hitNo description
Gene3DG3DSA:3.10.20.2401.7E-20838921No hitNo description
PROSITE profilePS5174520.935840923IPR000270PB1 domain
PfamPF005642.2E-15840922IPR000270PB1 domain
SMARTSM006668.2E-23840923IPR000270PB1 domain
CDDcd064071.07E-38841922No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 938 aa     Download sequence    Send to blast
MEDGAFTLND MFARLSDNTT TDFGLMGEFF YDGFRLETTE RSNFCQPLPF TAASLASQPF  60
LFSTLDTTLG HPLPTTDQVT LQEDTEIDKV VDNLFAQMDE FSATRREASP PPDSSGQPSS  120
FQVEGTQMNK RLWIGPNRNP SPTLSVKKRL VQAIEYLKDS TRNKDVLIQI WVPVKRGGKH  180
VLITNNQPYS LNPNSRSLVE YRYVSQNYQF AAEKDSKELV GLPGRVFLKK LPEWTPDVRY  240
FKREEYPRVN HAHQHNVRGS IAVPVFESGS GTCLGVVEIV TTTQKTHYHP ELEDVCRALE  300
DYNESYLAAL AEILYILTCV CDTHKLPLAQ TWAPCIQQGK GGCLHSDENV ASCVSTVDSA  360
CYVRDPQVLP FHFACSEQHL LKGEGVAGGA FNTNQPCFAT DVTAFSKTEY PLSHHARMFG  420
LCSAVAIRLR SIYTGLADFV LEFFLPLDCK NTEDQKRMLS SLSSVIQQNC QSLRVVTDQE  480
LQVEKELLPR EKVSLPVGGS HEEESRKPIS PPYRDPSDQD ASSWITQMMD AQRKGKEPAV  540
SLENHKDEQE ENFKVTATHW DYTQRESVHA STFSEPNQMQ ENFGPEGGSG GSLDFSSVSG  600
SHSSGAKRAG ERRRSKTEKS ISLQVLRQYF AGSLKDAAKS IGVCPTTLKR ICRQHGITRW  660
PSRKIKKVGH SLQKLQLVID SVHGAEGSIK LSSFYSNFPE LSSPNKPGTS NISASKNHDH  720
LHQVNTQPDG SIISPGTTTS KSTSSSGSHN SSSSLFGSTG SKHLFPLGNV FTTGNALAEE  780
HPGGMLKRAR TDAELHDMGQ EETKLMVRSQ SQKIQKDHFS LEPLHPLATS SNQILRDSAT  840
FKVKAIFGKE KVRFSLQSHW GFGDVQHEVL RRFNVEDVGK IDLKYLDDDD EWVLLTCDAD  900
LEECIDIHRL AKRRTIKVSL HHACHPNLGS SFGSSGPA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1908917RLAKRRTIKV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009623517.10.0PREDICTED: protein NLP2-like
RefseqXP_016493353.10.0PREDICTED: protein NLP2-like
RefseqXP_018632685.10.0PREDICTED: protein NLP2-like
TrEMBLA0A1S4BWX70.0A0A1S4BWX7_TOBAC; protein NLP2-like
STRINGXP_009623517.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15982467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35270.10.0Nin-like family protein