PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01341g00015.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB
Protein Properties Length: 282aa    MW: 29845.8 Da    PI: 6.724
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01341g00015.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.81.9e-111154344
                              SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
           Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                               W+ e d+ + +a + ++ +   +W++Ia+ ++ g+tl+++k+++
  Peinf101Scf01341g00015.1 11 VWSREQDKAFENALATYPEDsedRWEKIASDVP-GKTLEEVKHHY 54
                              6********************************.**********9 PP
2Myb_DNA-binding42.12e-13124168347
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                               +WT++E+ l++ +  ++G+g+W++I+r +  +Rt+ q+ s+ qky
  Peinf101Scf01341g00015.1 124 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 168
                               6*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512938.433760IPR017884SANT domain
SMARTSM007174.4E-10860IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.1E-61059IPR009057Homeodomain-like
SuperFamilySSF466896.9E-121066IPR009057Homeodomain-like
PfamPF002499.7E-91154IPR001005SANT/Myb domain
CDDcd001671.22E-91258No hitNo description
PROSITE profilePS5129417.581116173IPR017930Myb domain
SuperFamilySSF466891.2E-16119174IPR009057Homeodomain-like
TIGRFAMsTIGR015572.4E-17121171IPR006447Myb domain, plants
SMARTSM007173.2E-10121171IPR001005SANT/Myb domain
CDDcd001677.32E-10124169No hitNo description
PfamPF002492.5E-11124168IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.3E-10124167IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MTVDESSGGS VWSREQDKAF ENALATYPED SEDRWEKIAS DVPGKTLEEV KHHYDLLLDD  60
VSRIESGCVP LPCYNSSSDS STSHGGGDEG TGKKSGNYGN SNGESNHGSG KSSRADQERR  120
KGIAWTEDEH RLFLLGLDKY GKGDWRSISR NFVVTRTPTQ VASHAQKYFI RLNSMNRDRR  180
RSSIHDITSV NTGEVAVPQG PITGQTNGSS AGSSSSKPSK QPAATSAAPP AVGIYGATSI  240
GQPIGPFASA VGTPVIIPPP AHIAYGVQPP IPGAVVPGAP MN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A3e-18977876RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that coordinates abscisic acid (ABA) biosynthesis and signaling-related genes via binding to the specific promoter motif 5'-(A/T)AACCAT-3'. Represses ABA-mediated salt (e.g. NaCl and KCl) stress tolerance. Regulates leaf shape and promotes vegetative growth. {ECO:0000269|PubMed:26243618}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00500DAPTransfer from AT5G08520Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salicylic acid (SA) and gibberellic acid (GA) (PubMed:16463103). Triggered by dehydration and salt stress (PubMed:26243618). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:26243618}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009613368.11e-168PREDICTED: transcription factor DIVARICATA
SwissprotQ9FNN61e-119SRM1_ARATH; Transcription factor SRM1
TrEMBLA0A1S3ZTM21e-162A0A1S3ZTM2_TOBAC; transcription factor DIVARICATA-like
STRINGXP_009613368.11e-168(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA41492445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.14e-98MYB family protein
Publications ? help Back to Top
  1. Wang T, et al.
    Salt-Related MYB1 Coordinates Abscisic Acid Biosynthesis and Signaling during Salt Stress in Arabidopsis.
    Plant Physiol., 2015. 169(2): p. 1027-41
    [PMID:26243618]
  2. Chen YS, et al.
    Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis.
    Plant Mol. Biol., 2017. 93(3): p. 299-311
    [PMID:27866313]