PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf01332g02008.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | B3 | ||||||||
Protein Properties | Length: 185aa MW: 21655.7 Da PI: 5.3573 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 34.8 | 3e-11 | 21 | 110 | 5 | 98 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS. CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr. 87 ++++ +++ ++lp k + +h ++ + +t+++ +W++kl +k + + +GW++Fv + gLkegD +vF+l + Peinf101Scf01332g02008.1 21 ILSKSCIQKDDFILPPKIL-QHLPVTVVP--ITIRN-GQIEWNMKL--NKLCAKRRFFDGWSKFVTDTGLKEGDGLVFELLeCNn 99 4455556666799999998.553343334..44444.6689*****..66555555668********************653666 PP SEE..EEEEE- CS B3 88 sefelvvkvfr 98 ++ + +v++++ Peinf101Scf01332g02008.1 100 KNVKSKVQILD 110 77777777776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 3.3E-12 | 11 | 110 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 2.55E-12 | 13 | 102 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 4.06E-10 | 16 | 110 | No hit | No description |
PROSITE profile | PS50863 | 11.124 | 17 | 112 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 8.0E-5 | 18 | 112 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 4.7E-9 | 18 | 109 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
MAYRNEESTP IDTSKPFFDS ILSKSCIQKD DFILPPKILQ HLPVTVVPIT IRNGQIEWNM 60 KLNKLCAKRR FFDGWSKFVT DTGLKEGDGL VFELLECNNK NVKSKVQILD GSFREELFQE 120 LGEARNRDFA HQIDQLNRDM DMLRGLYNFL SRDIDDMRGE IRFVMQKLFE HTAQFDDGAM 180 HNEQM |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1819 | 21 | 54 |