PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01271g03047.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 916aa    MW: 103062 Da    PI: 5.3068
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01271g03047.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.21.9e-1535124198
                               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                               f+k +++s+v+   +l+lp+ f++ h   ++ ++t+tl des  +++ k+  ++++    l++GW++F  a++L egD++vF++ 
  Peinf101Scf01271g03047.1  35 FVKPMIRSNVSGGFWLSLPRLFCQLHL--PRHDITITLVDESQDEFKTKYLAERNG----LSGGWRGFSLAHNLVEGDVLVFQMF 113
                               89*********************8884..45789****************555555....9**********************64 PP

                               SSSEE..EEEEE- CS
                        B3  86 grsefelvvkvfr 98 
                               +  +  l+v ++r
  Peinf101Scf01271g03047.1 114 RFCK--LKVYIVR 124
                               4233..4777766 PP
2B352.96.9e-17286371192
                               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                               f+k ++ps+v+   +l +pkkf++++  + +++ t +l de+g+++  k+ ++k++    l++GW++F  a++L egD++vF+l+
  Peinf101Scf01271g03047.1 286 FVKYMLPSHVTGGFWLGFPKKFCASYL-P-KQDDTAVLVDEDGKEYATKYLVEKNG----LSGGWRGFSIAHRLLEGDVLVFQLI 364
                               8999**********************5.3.35669***************777777....************************9 PP

                               SSSEE.. CS
                        B3  86 grsefel 92 
                               +  +f++
  Peinf101Scf01271g03047.1 365 QPCKFKP 371
                               9888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019365.89E-2128126IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.5E-1728126IPR015300DNA-binding pseudobarrel domain
CDDcd100174.00E-2333124No hitNo description
PfamPF023621.9E-1335125IPR003340B3 DNA binding domain
SMARTSM010194.4E-1635126IPR003340B3 DNA binding domain
PROSITE profilePS5086311.44835126IPR003340B3 DNA binding domain
SuperFamilySSF1019362.35E-21280369IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.7E-17280369IPR015300DNA-binding pseudobarrel domain
CDDcd100176.88E-23284370No hitNo description
PROSITE profilePS5086311.11286386IPR003340B3 DNA binding domain
PfamPF023623.6E-15286371IPR003340B3 DNA binding domain
SMARTSM010191.2E-18286372IPR003340B3 DNA binding domain
PfamPF052666.8E-9517621IPR007930Protein of unknown function DUF724
PfamPF052666.5E-10794898IPR007930Protein of unknown function DUF724
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 916 aa     Download sequence    Send to blast
MAMMHNVYGQ IDLASSAQYR AEEVQSRLNT KYPSFVKPMI RSNVSGGFWL SLPRLFCQLH  60
LPRHDITITL VDESQDEFKT KYLAERNGLS GGWRGFSLAH NLVEGDVLVF QMFRFCKLKV  120
YIVRANYLAE VDAALVLLHL DAHQKHIDPV HQRQDIRNIK MAGFKRQRLS TQEGDSYSAE  180
NMLHQLHKHS HPRNTCEDLD IPSKGLAYED LSINMDAVKA GKFNDLPNGF SSWNTRPTGL  240
EKIEIISFSS GTQKKTYKTS SVDANSAAML RAEEVQANLP SQFPSFVKYM LPSHVTGGFW  300
LGFPKKFCAS YLPKQDDTAV LVDEDGKEYA TKYLVEKNGL SGGWRGFSIA HRLLEGDVLV  360
FQLIQPCKFK PKGDNEDMKI GEAKEETFLE PSALDIHQDD KQEVILISDS DRGPSALDIH  420
QGEQEVILIS DSDHDTATEH CGIDSDNGSE VLEGIRFSES RIDFKDLKDF SGFNILVDGL  480
IIDSEIPAHI RTKYYELCRT QNSFLHDNVF GGLNCKLAAG MITETVNIAD AIRASKISTP  540
RDYLETWDNT LKGFECLGLE VGFLRARLNK LVSMSSESKQ ILETKRNELA EAKEELKNLE  600
AKLLNAKQVI KNLDSEIEAL TGNDKSFEIN FKALAASPCF VKYMLPSHVT VNMHHLNLTK  660
NTFYLLILFQ INQDEDMKIC DAKEETFLEP SALDTHQDDK QEVILISDSD HGPATDQCGN  720
DSDNGSEILE GIRFSESKID FKDVKDFSGF NILVDGLIID SEIPAHIQTK YYELCSTQKS  780
FLHDHLFGGL NCKLAAGMIT ETVNIADAIR ASKISTPRDY LETWDNTLKG FECLGMEVGF  840
LRARLNKLVS MSSESKQILE TKRNELAEAK EEMKNLEAKL SNVKQVIKNL DSEIEALTGK  900
DKSFEIKFKA LAASPW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018629601.10.0PREDICTED: B3 domain-containing protein Os01g0234100-like isoform X1
TrEMBLA0A1S4AG970.0A0A1S4AG97_TOBAC; B3 domain-containing protein Os01g0234100-like
STRINGXP_009612762.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30232343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.14e-41B3 family protein