PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01262g06014.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 322aa    MW: 36031.7 Da    PI: 5.141
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01262g06014.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.52.8e-143887255
                              HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                              r +h+  E+rRR++iN++f+ Lr l+P+     ++K + a+ L ++++Y+ sLq
  Peinf101Scf01262g06014.1 38 RSKHSVTEQRRRSKINERFQILRNLIPHT----DQKRDTASFLLEVIQYVESLQ 87
                              899*************************8....8*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.11E-1834108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.1E-2234108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.3073686IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-113887IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.81E-133891No hitNo description
SMARTSM003531.3E-104292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MKSGKGHHVE EEEEDEYDFG SNKNTKDGKN SDKANAIRSK HSVTEQRRRS KINERFQILR  60
NLIPHTDQKR DTASFLLEVI QYVESLQEKV QKYEGSYEPW SSEPTKLMPW RNSHWRTQSV  120
PAHPQALKND AGTGPAYAGR FDENLAAATS SMQAIQHNPV ESLPGTDVYF KSIDQQKELA  180
SRGIAIQMPL QASMPVSLQN DSAFSDSLHR PGSDECPNTT NALNHEEEFM IEGGTISISS  240
SYSQGLLDSL TQALQTAGLD LSQATISLQI NLAKQVNRGM TSGPSVAKDN ETPPRVGNQF  300
MEQFRDEDHD EDLDQAEKRL KI
Functional Description ? help Back to Top
Source Description
UniProtPositive brassinosteroid-signaling protein.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00219DAPTransfer from AT1G69010Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by heat treatment. {ECO:0000269|PubMed:12679534}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015076812.11e-168transcription factor BIM2-like isoform X2
SwissprotQ9CAA42e-95BIM2_ARATH; Transcription factor BIM2
TrEMBLA0A2G3B7251e-165A0A2G3B725_CAPCH; Transcription factor BIM2
TrEMBLA0A3Q7H7T91e-165A0A3Q7H7T9_SOLLC; Uncharacterized protein
STRINGSolyc05g011810.2.11e-166(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44262337
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.13e-94BES1-interacting Myc-like protein 2
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]