PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01262g04018.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 550aa    MW: 59560.4 Da    PI: 5.0831
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01262g04018.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.45.3e-08355410355
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC.....TTS-.STCHHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkas..kapskK.lsKaeiLekAveYIksLq 55 
                                +h+ +Er RR++i +++  L++l+P +   + ++     Ka +L + ++Y++sLq
  Peinf101Scf01262g04018.1 355 NSHSLAERIRREKISERMKFLQDLVPGCNkvGDGDLQvTGKAVMLDEIINYVQSLQ 410
                               58*************************8778555555599***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.32E-15350428IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.92E-10350414No hitNo description
PROSITE profilePS5088815.301352409IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-14353426IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.1E-5355410IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.3E-11358415IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    Send to blast
MDIASKNESE QEKGNEEVMN YQSPNVSSEW QQLSGSNLTN VSMGLISSTL PMVDSFCPSN  60
WDQPTSSQNL GFCDATIQTN HSTANAEMGL GPFRAGVDRT LGTTGWTPPS NAMLKGGIFL  120
PPAPMMLPQS LAQFPSDSGF IERAARFSCF SGGNFGDMLN PFSSIPESMN PYYRGLAPMQ  180
GPQEVLASNN GLKSPSTKQH MSNVAESSKD MSLPVDQRDT ERSPLKNEKK IETFARSQDE  240
VKEVGGVSGN DSDEAECSGR QEEMEGAGEE SYGKDNGSKK RKRGGQDTER DRMKVAQQTP  300
AEPAKDQSEI QRGEQNLNSI ASKPGGKNGK QGSQGSDPTK EDYIHVRARR GQATNSHSLA  360
ERIRREKISE RMKFLQDLVP GCNKVGDGDL QVTGKAVMLD EIINYVQSLQ RQVEFLSMKL  420
ATVNPRLDFN IDGLLAKDIL QSRAGPSSSL AFPPDMTMAY PLLHPPHPGM LQSSLPGLGI  480
PSDAFRRAVN PHLPTASGVP GDYKDPSSQA PNVWDNELHN IVQMGLNSSA PLSSQDLSGP  540
LPAGQMKAEP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006348631.10.0PREDICTED: transcription factor bHLH49-like isoform X2
TrEMBLM1BQK60.0M1BQK6_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000505850.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28712150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.31e-113bHLH family protein