PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01252g02023.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB
Protein Properties Length: 383aa    MW: 43951.6 Da    PI: 9.3922
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01252g02023.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.58.7e-151461148
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                              rg+W+ eEd +l  +v+++G  +W+  +++ g+ R++k+c++rw +yl
  Peinf101Scf01252g02023.1 14 RGAWSDEEDNKLRAYVERFGHWNWRQLPKYAGLMRCGKSCRLRWMNYL 61
                              89******************99************************97 PP
2Myb_DNA-binding461.2e-1467111147
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                               +g+ + eE +l+++++++lG++ W++Ia++++ gR+++++k+ w+ +
  Peinf101Scf01252g02023.1  67 KGNYSNEEGQLIIKLHNELGNR-WSAIAEKLP-GRSDNDIKNQWHAH 111
                               7899******************.*********.***********976 PP
3Myb_DNA-binding544e-17219266148
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
           Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                               rg+W++eEd +l  +v+++G ++W+  +++ g+ R++k+c++rw +yl
  Peinf101Scf01252g02023.1 219 RGSWSEEEDNKLRSYVERYGHPNWRQLPKYAGLMRCGKSCRLRWMNYL 266
                               89********************************************97 PP
4Myb_DNA-binding55.71.1e-17272316147
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                               +g+ + eE++l++++++qlG++ W++Ia++++ gR+++++k++w+ +
  Peinf101Scf01252g02023.1 272 KGKYSHEEEQLIIKLHNQLGNR-WSAIAEKLP-GRSDNDIKNHWHAH 316
                               7899******************.*********.***********976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.393961IPR017930Myb domain
SuperFamilySSF466893.82E-2811108IPR009057Homeodomain-like
SMARTSM007171.3E-101363IPR001005SANT/Myb domain
PfamPF002492.4E-131461IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.8E-211568IPR009057Homeodomain-like
CDDcd001675.05E-81661No hitNo description
PROSITE profilePS5129421.77862116IPR017930Myb domain
SMARTSM007171.7E-1566114IPR001005SANT/Myb domain
PfamPF002491.5E-1367111IPR001005SANT/Myb domain
CDDcd001674.55E-969112No hitNo description
Gene3DG3DSA:1.10.10.601.4E-2369115IPR009057Homeodomain-like
PROSITE profilePS5129417.086214266IPR017930Myb domain
SuperFamilySSF466891.05E-29216313IPR009057Homeodomain-like
SMARTSM007172.1E-13218268IPR001005SANT/Myb domain
PfamPF002491.3E-15219266IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.2E-22220273IPR009057Homeodomain-like
CDDcd001677.53E-10221266No hitNo description
PROSITE profilePS5129425.829267321IPR017930Myb domain
SMARTSM007174.1E-17271319IPR001005SANT/Myb domain
PfamPF002492.7E-16272316IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.608.2E-25274320IPR009057Homeodomain-like
CDDcd001671.69E-10274317No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009733Biological Processresponse to auxin
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MVRTPSVDKN GMKRGAWSDE EDNKLRAYVE RFGHWNWRQL PKYAGLMRCG KSCRLRWMNY  60
LRPGLKKGNY SNEEGQLIIK LHNELGNRWS AIAEKLPGRS DNDIKNQWHA HLKKRAKANS  120
YTSTLMEQMS TESSQSGSQS EQSCKLSELE ACDKKEVTSA AIDRLDSVQP VSLEVSSSSL  180
LNGIMDYWME EEDHMFRPSM ELLSIMVRTP SIDKSGMKRG SWSEEEDNKL RSYVERYGHP  240
NWRQLPKYAG LMRCGKSCRL RWMNYLRPGL KKGKYSHEEE QLIIKLHNQL GNRWSAIAEK  300
LPGRSDNDIK NHWHAHLKKR SKSNTNSSAI MMKQLIECSQ SGSQDDKHSN SKFAEHDTFS  360
PIDSVQPVSS DVSSGSVLNG MDC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C3e-241232025128MYB TRANSFORMING PROTEIN
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that regulates freezing tolerance by affecting expression of CBF genes. {ECO:0000269|PubMed:24415840}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salicylic acid (SA), jasmonic acid (JA), salt (NaCl), ethylene and auxin (IAA) (PubMed:16463103). Down-regulated by cold treatment (PubMed:24415840). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:24415840}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotQ9SJX86e-52MYB14_ARATH; Transcription factor MYB14
STRINGXP_009766826.16e-76(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2487022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.12e-53myb domain protein 14
Publications ? help Back to Top
  1. Chen Y, et al.
    AtMYB14 Regulates Cold Tolerance in Arabidopsis.
    Plant Mol. Biol. Rep., 2013. 31: p. 87-97
    [PMID:24415840]