PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01217g00015.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Nin-like

Protein Properties

Length: 790aa MW: 89744.5 Da PI: 5.7238

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01217g00015.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	48.1	2.3e-15	615	659	4	48
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 is +l+++F +++ dAAk+Lgv ++LKr CR y I RWP+ k Peinf101Scf01217g00015.1 615 GISRGVLEEQFGKKLSDAAKSLGVARSTLKRMCRDYDIYRWPRSK 659 688899************************************855 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	11.627	597	686	IPR003035	RWP-RK domain
Gene3D	G3DSA:1.10.10.60	4.5E-4	607	651	IPR009057	Homeodomain-like
Pfam	PF02042	1.8E-12	620	659	IPR003035	RWP-RK domain
SuperFamily	SSF54277	9.53E-16	697	787	No hit	No description
Pfam	PF00564	1.1E-15	707	788	IPR000270	PB1 domain
PROSITE profile	PS51745	19.544	707	790	IPR000270	PB1 domain
SMART	SM00666	7.1E-16	707	789	IPR000270	PB1 domain
Gene3D	G3DSA:3.10.20.240	2.4E-15	709	787	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 790 aa Download sequence Send to blast
MSIELKFSHK KQGDGSNRWV FWTRRNDDEL NHVKSFFPVL RDSILPDTNG NCQVNRRLVR 60 NLVELLDLKD QPFALNGKLH EGLWAYRRVC LHTIASLDAT EIDEAKRIHF HGRPARVFKS 120 GMPEFSPHVR YYYMDEYPLR KFAMCLGVGS YWTLPVFTSS RDHCVGVLEY AFEANECLDL 180 CSILDSFIDN HRILKTMGLA LIPSWLAYPQ ELPFAQTWIP VFDSSRMEML ITSPSTKYWS 240 EDITSVEFMA VSDLHHVRIG QGLVGKVLSS KGSCFCKDIT QLSIEFYPLV PIARCAKFTA 300 CFAMLVRPRS ANHVVLEFFL PREESLNGNP QSFLSKLLAT IKEQLPSFFL DSGPILFVEV 360 IRTAGADEID SFEIGQPQPM VRSKGKEKLM QFDSLNEESV DLGPSSSTSV VAHSMEIVKD 420 SSSIDDIARS ENIFESENRE ETVLPNSVQR QGVEEPDAVD KESNFVQLKE NNVAYTDSDK 480 FTTFVVDSEQ NFQQNLSTDH KASLDEELRS FEISLHQLSS MVQYDTNIQL FDFDPSSSSD 540 FEEIVNVDYG WDARMNLQSN NRREPTQLDV AHQQRLEEAD AVDKQRHSVH VKDSTISHNC 600 SEKHKRIKRM EKEYGISRGV LEEQFGKKLS DAAKSLGVAR STLKRMCRDY DIYRWPRSKS 660 TNDICSLSKS KSVKGVKLKS LNSSQEDLQP HASLSIGMAT TAALDNTMSI KVTYKDVTVK 720 FPLSLSSGKI DLEAEVEKRL KIPVGSSSIK YEDEDNDWIS ITCDSDLEYG IHTLRSSGRT 780 SMKMIVEPLN

Sequence ? help Back to Top

Protein Sequence Length: 790 aa Download sequence Send to blast

MSIELKFSHK KQGDGSNRWV FWTRRNDDEL NHVKSFFPVL RDSILPDTNG NCQVNRRLVR  60
NLVELLDLKD QPFALNGKLH EGLWAYRRVC LHTIASLDAT EIDEAKRIHF HGRPARVFKS  120
GMPEFSPHVR YYYMDEYPLR KFAMCLGVGS YWTLPVFTSS RDHCVGVLEY AFEANECLDL  180
CSILDSFIDN HRILKTMGLA LIPSWLAYPQ ELPFAQTWIP VFDSSRMEML ITSPSTKYWS  240
EDITSVEFMA VSDLHHVRIG QGLVGKVLSS KGSCFCKDIT QLSIEFYPLV PIARCAKFTA  300
CFAMLVRPRS ANHVVLEFFL PREESLNGNP QSFLSKLLAT IKEQLPSFFL DSGPILFVEV  360
IRTAGADEID SFEIGQPQPM VRSKGKEKLM QFDSLNEESV DLGPSSSTSV VAHSMEIVKD  420
SSSIDDIARS ENIFESENRE ETVLPNSVQR QGVEEPDAVD KESNFVQLKE NNVAYTDSDK  480
FTTFVVDSEQ NFQQNLSTDH KASLDEELRS FEISLHQLSS MVQYDTNIQL FDFDPSSSSD  540
FEEIVNVDYG WDARMNLQSN NRREPTQLDV AHQQRLEEAD AVDKQRHSVH VKDSTISHNC  600
SEKHKRIKRM EKEYGISRGV LEEQFGKKLS DAAKSLGVAR STLKRMCRDY DIYRWPRSKS  660
TNDICSLSKS KSVKGVKLKS LNSSQEDLQP HASLSIGMAT TAALDNTMSI KVTYKDVTVK  720
FPLSLSSGKI DLEAEVEKRL KIPVGSSSIK YEDEDNDWIS ITCDSDLEYG IHTLRSSGRT  780
SMKMIVEPLN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016440586.1	0.0	PREDICTED: protein NLP7-like isoform X1
TrEMBL	A0A1S3XKX9	0.0	A0A1S3XKX9_TOBAC; protein NLP7-like isoform X1
STRING	XP_009783714.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA13981	7	11

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	7e-31	Nin-like family protein