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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peinf101Scf01182g01006.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family |
GRAS |
Protein Properties |
Length: 573aa MW: 62981.1 Da PI: 4.8957 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Scf01182g01006.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 447.6 | 8.1e-137 | 188 | 563 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfs 85
lv++L++cAeav++++++la+al+ ++ la ++ +m+++a+yf+eALa+r+++ + p+++ e++ +++l++ f+
Peinf101Scf01182g01006.1 188 LVHTLMACAEAVQQENFNLADALVRHIGILAVSQSGAMRKVATYFAEALARRIYK--------IYPQDQIESSYTDVLQM--HFY 262
689***************************************************9........44555554455555444..4** PP
GRAS 86 evsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAe 170
e++P+lkf+h+taNqaIlea++++++vH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+++++++l+++g++La++Ae
Peinf101Scf01182g01006.1 263 ETCPYLKFAHFTANQAILEAFNNCNKVHVIDFSLKQGMQWPALMQALALRPAGPPAFRLTGIGPPQPDNSDALQQVGWKLAQLAE 347
************************************************************************************* PP
GRAS 171 elgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFle 255
++gv+fef+ +va++l+dl+ L++++ Ea+aVn+v++lhrll+++ le+ v++ vk ++Pk+v++veqea+hn+e F++
Peinf101Scf01182g01006.1 348 TIGVEFEFRGFVANSLADLDATILDIRETEAVAVNSVFELHRLLARPRGLEK----VMSSVKLMKPKIVTIVEQEANHNAEMFMD 428
********************************************99999999....***************************** PP
GRAS 256 rflealeyysalfdsleak.................lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaG 323
rf eal+yys++fdsle++ + ++++ ++++++lgr+i+nvvaceg +r+erhetl++Wr r+++aG
Peinf101Scf01182g01006.1 429 RFNEALHYYSTMFDSLESSsslsptttssstgqqpiV--VNNQDLVMSEVYLGRQICNVVACEGVDRVERHETLSQWRVRMNSAG 511
****************988899999998887665431..35999***************************************** PP
GRAS 324 Fkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
F pv+l+++a kqa++ll+ ++ ++gyrvee++g+l+lgW++rpL+++SaW+
Peinf101Scf01182g01006.1 512 FAPVHLGSNAFKQASMLLALFAgGHGYRVEENDGCLMLGWHTRPLIATSAWQ 563
***************************************************6 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006808 | Biological Process | regulation of nitrogen utilization |
GO:0009723 | Biological Process | response to ethylene |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009863 | Biological Process | salicylic acid mediated signaling pathway |
GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
GO:0010187 | Biological Process | negative regulation of seed germination |
GO:0010218 | Biological Process | response to far red light |
GO:0010233 | Biological Process | phloem transport |
GO:0042538 | Biological Process | hyperosmotic salinity response |
GO:2000033 | Biological Process | regulation of seed dormancy process |
GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process |
GO:0005634 | Cellular Component | nucleus |
Sequence ? help Back to Top |
Protein Sequence Length: 573 aa
Download sequence Send
to blast |
MKRDRDREKS QVLGKSKIWE EEEQQPDAGM DELLAVLGYK VKSSDMAEVA QKLEQLEMAM 60 GTTLEDGINH LSTDTVHKNP SDLSGWVQSM LSELNNTSSI STNFDMAGST TGGVENELNI 120 SSSMNIINDD DLRAIPGGAV FVNNELEDAQ TSHKRLRSSS SSAGSSASFL TDSRPVVLVD 180 SQETGVRLVH TLMACAEAVQ QENFNLADAL VRHIGILAVS QSGAMRKVAT YFAEALARRI 240 YKIYPQDQIE SSYTDVLQMH FYETCPYLKF AHFTANQAIL EAFNNCNKVH VIDFSLKQGM 300 QWPALMQALA LRPAGPPAFR LTGIGPPQPD NSDALQQVGW KLAQLAETIG VEFEFRGFVA 360 NSLADLDATI LDIRETEAVA VNSVFELHRL LARPRGLEKV MSSVKLMKPK IVTIVEQEAN 420 HNAEMFMDRF NEALHYYSTM FDSLESSSSL SPTTTSSSTG QQPIVVNNQD LVMSEVYLGR 480 QICNVVACEG VDRVERHETL SQWRVRMNSA GFAPVHLGSN AFKQASMLLA LFAGGHGYRV 540 EENDGCLMLG WHTRPLIATS AWQLTAAAGG GES
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). Its degradation is not essential for germination. {ECO:0000250, ECO:0000269|PubMed:15347801}. |