PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01175g08074.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 437aa    MW: 47634.5 Da    PI: 9.51
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01175g08074.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.55.1e-05204226223
                               EETTTTEEESSHHHHHHHHHH.T CS
                   zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                               +C++Cg+ F  ++ L+ H  + H
  Peinf101Scf01175g08074.1 204 TCHKCGEQFGKWEALEAHHLSkH 226
                               7*****************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280205226IPR007087Zinc finger, C2H2
SuperFamilySSF563991.01E-21228436No hitNo description
Gene3DG3DSA:3.90.228.102.5E-8237428IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MGEKKNMPAV WFSLKRSLHC KSEPGDVHDP KTKKHLSTIL TRKGGGGRSG CSRSIANLKD  60
VIHGSKRHLE RPPSCSPRSI GSSEFLNPIT HEVILSNSRC ELKITSFNGF QESASSDGTN  120
GSSTFVGTLR PGTPGPGGHP TMHYFNSGYR NNPVATPTRR SASFLVDKEG AAVGGTGILS  180
GVHSFPSKTR HSLDNDINGS SGVTCHKCGE QFGKWEALEA HHLSKHAVSE LLEGDSSRKI  240
VEIICRSSWL KSENHCGRIE RVLKVHNTQK TLARFEEYRE MVKMKASKLP KKHPRCIADG  300
NELLRFYGTT LACGLGMNGS CSLCVSDKCC VCRIIRNGFS TKKELKGGIG VFTTSTSARA  360
FECIEMPQDD SSLRKALIVC RVVAGRVHRP LENIQEMAGQ TGFDSLAGKV GVYSNIEELY  420
LLNSRALLPC FVVICKA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU5609000.0EU560900.1 Capsicum annuum clone DEG190-B transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009593520.10.0PREDICTED: uncharacterized protein LOC104090171
TrEMBLA0A1S4DMT50.0A0A1S4DMT5_TOBAC; uncharacterized protein LOC107831486
STRINGXP_009593520.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22442235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.11e-175C2H2 family protein