PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf01164g01013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | Nin-like | ||||||||
Protein Properties | Length: 991aa MW: 108019 Da PI: 5.6145 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 91.8 | 5e-29 | 599 | 650 | 1 | 52 |
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ Peinf101Scf01164g01013.1 599 AEKHVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 650 5899**********************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 16.984 | 582 | 670 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 4.1E-26 | 603 | 650 | IPR003035 | RWP-RK domain |
SuperFamily | SSF54277 | 3.27E-22 | 888 | 973 | No hit | No description |
PROSITE profile | PS51745 | 20.008 | 891 | 973 | IPR000270 | PB1 domain |
SMART | SM00666 | 1.5E-22 | 891 | 973 | IPR000270 | PB1 domain |
CDD | cd06407 | 1.19E-32 | 892 | 972 | No hit | No description |
Pfam | PF00564 | 9.0E-19 | 892 | 972 | IPR000270 | PB1 domain |
Gene3D | G3DSA:3.10.20.240 | 1.3E-24 | 892 | 973 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 991 aa Download sequence Send to blast |
MERGVGFWAS PRGQMEGGTA FDAGVRSSNV DDSYNNVMEI MNFDAYAGWC TSPSAAEQMF 60 ASYAAAFSSP MNPVSQSYAQ YEGLSYTEQN TSGAFPPMDT NMGGSTLGGA EKMMFGQNDE 120 QLHYVVDSTD GVGLLAKGSK NSSQQGDDDD DIGNSMILKS PSQPLAERML RALAMFKESS 180 GAGILAQVWI PMRSGDQYVL STCEQPYLLD QALSGYREVS RKFTFDTDTK TGSVPGLPGR 240 VFSSRIPEWT SNVLYYKEAE YLRVQYAVNH DVRGSIALPI FEDDAAETPC CAVLELVTVK 300 EKPNFDLEMD HVCRALQAVN LKSIAPPRLH SQSLSKNQRA ALAEIADVLR AVCHAHKLPL 360 ALTWIPCSLN EGEGDETIRV HTRGWNANSH AKCVLCVEDT ACYVSDKEMQ GFVHACMEHY 420 LEVGEGIVGK ALQSNHPFFY PDVKEYHISE YPLAHHARKF GLNAAVAIRL RSTFTGNDDY 480 ILEFFLPISM KGSTEQQLLL NNLSGTMQRI CRSLRTVSHA EFVGEGAKFG LQDGSVQNLP 540 PIALLRRNSQ HSLDSNSNSE SGEPLGVCDS TTAGIEANGS REQTMTGSRR PMEKKRSTAE 600 KHVSLSVLQQ YFSGSLKDAA KSIGVCPTTL KRICRQHGIS RWPSRKINKV NRSLKKIQTV 660 LESVQGVEGG LKFDPATGGL VPAGSIIHDF DAQQSIFFPC KDVSVKNSNS VFQEAVTVPS 720 TSSIEKESSM VKMEEESYVD RNQLSQSNHI NTSSFKEGNT SNIPVSGSSG PASLNTMPLT 780 SSENAHLGSF LAKEGCRRWG LNTDTLAHSD CQFSGCSYPM ATGGIVDTKM KGDNEMDGDG 840 GVEHNQPSSS AMTDSSNGSG SMMNGSSSSS RNVGARKHSK VEANCVDSGS IITVKATYKE 900 DTTRFKFEPS TGCFQLYEEV AKRFKLQTGT FQLKYLDDEE EWVMLVNDAD LHECLEILDF 960 VGGRTVKFLV RDTPLTMGSS GSSNCFLAGG S |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009795771.1 | 0.0 | PREDICTED: protein NLP9-like | ||||
Refseq | XP_009795773.1 | 0.0 | PREDICTED: protein NLP9-like | ||||
Refseq | XP_009795774.1 | 0.0 | PREDICTED: protein NLP9-like | ||||
Refseq | XP_009795775.1 | 0.0 | PREDICTED: protein NLP9-like | ||||
Refseq | XP_009795776.1 | 0.0 | PREDICTED: protein NLP9-like | ||||
Refseq | XP_009795777.1 | 0.0 | PREDICTED: protein NLP9-like | ||||
Refseq | XP_009795778.1 | 0.0 | PREDICTED: protein NLP9-like | ||||
Swissprot | O22864 | 0.0 | NLP8_ARATH; Protein NLP8 | ||||
TrEMBL | A0A1U7XXY1 | 0.0 | A0A1U7XXY1_NICSY; protein NLP9-like | ||||
STRING | XP_009795771.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3981 | 24 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59580.2 | 0.0 | Nin-like family protein |
Publications ? help Back to Top | |||
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