PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf01142g04002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | ERF | ||||||||
Protein Properties | Length: 265aa MW: 29472.5 Da PI: 10.1106 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59 | 1.2e-18 | 124 | 173 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +grW AeIrd r r++lg+f+taeeAa+a++aa++ l+g Peinf101Scf01142g04002.1 124 NYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARWLRG 173 59*******.**********32....25**********************97776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.36E-18 | 123 | 182 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 7.1E-29 | 124 | 181 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 6.8E-13 | 124 | 173 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.273 | 124 | 181 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.2E-31 | 124 | 187 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.63E-21 | 124 | 182 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 1.0E-10 | 125 | 136 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.0E-10 | 147 | 163 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence Send to blast |
MYNAHIQMLQ KVHDPLFFPT QESLNQHEQI DHLMHQLPHN FCIDSFPEIP TQENEKSPAL 60 EGIGAVVGEH VLFGGCDKNK NTNDQNFETG TSVSIIKRTG GTDKVRSLGE EKRNIGNVIP 120 VQKNYRGVRK RPWGRWSAEI RDRIGRCRHW LGTFDTAEEA ARAYDAAARW LRGSKARTNF 180 QIPPIVPLPL TISSTSTSSS SSSSAEVKKN KKVSTRGKGN MPINRKCSVV TSAAHLFSSD 240 CVVNEVKKGV VAHVELDLKL GFGKK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 2e-17 | 123 | 182 | 1 | 61 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009611846.1 | 3e-95 | PREDICTED: ethylene-responsive transcription factor ERF084-like | ||||
Refseq | XP_016449845.1 | 3e-95 | PREDICTED: ethylene-responsive transcription factor ERF084-like | ||||
Swissprot | Q9M8M5 | 1e-27 | ERF84_ARATH; Ethylene-responsive transcription factor ERF084 | ||||
TrEMBL | R4WAR8 | 7e-94 | R4WAR8_TOBAC; Ethylene response factor #231 | ||||
STRING | XP_009611846.1 | 1e-94 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11552 | 22 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80580.1 | 1e-28 | ERF family protein |