PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01142g00011.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 371aa    MW: 40284.9 Da    PI: 7.5573
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01142g00011.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP224.28.3e-08220249235
                       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgk 35 
                               +y+G+r+++  g+W+AeIrdps+      ++lg+
  Peinf101Scf01142g00011.1 220 QYRGIRQRP-CGKWAAEIRDPSK---GVWVWLGT 249
                               69*******.7*********943...27777765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.25E-12220251No hitNo description
Gene3DG3DSA:3.30.730.101.1E-11220244IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-6220249IPR016177DNA-binding domain
SMARTSM003806.6E-6220263IPR001471AP2/ERF domain
PROSITE profilePS5103211.601220249IPR001471AP2/ERF domain
Gene3DG3DSA:3.40.50.2002.6E-18245332IPR000209Peptidase S8/S53 domain
PfamPF000821.4E-11249301IPR000209Peptidase S8/S53 domain
SuperFamilySSF527431.83E-18251333IPR000209Peptidase S8/S53 domain
PROSITE patternPS001380261271IPR023828Peptidase S8, subtilisin, Ser-active site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006508Biological Processproteolysis
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004252Molecular Functionserine-type endopeptidase activity
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MKQYVYEDGG STSVDTGFYS FAPSAGADIY FNSDVGSNSF DCSDFGWGEP FPRTPEISSV  60
LSAAIESNEA QFVEDARPEK KLKSGPNNPV ADDGNTVNKL SEELSAFEPG MKFLQIPYLE  120
GNWDASADTF LNTSAIQDGE NATDLRSFDD VPSLMGGVSG GGKKKIHRRA CLSHGFTERT  180
DLRPVLSIDR VTSVQGSKSV KSADSEKDAD CSSKRKRKNQ YRGIRQRPCG KWAAEIRDPS  240
KGVWVWLGTS KRRTEFNILS GTSMACPHVS GLGALLKAAH PGWSPAAMRS ALLTAAYIVD  300
NRGQIMMDES TGNSSTVIDF GGGHVHPQNA MDPDCKGAKR AGHVGNLNYP SFSAVFQQYG  360
KHKLSTHFIR F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3vta_A4e-14247366399547Cucumisin
3vta_B4e-14247366399547Cucumisin
4yn3_A4e-14247366399547Cucumisin
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ2595960.0HQ259596.1 Petunia x hybrida ethylene-responsive-element-binding factor 2 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006342907.19e-84PREDICTED: ethylene-responsive transcription factor RAP2-12-like isoform X1
RefseqXP_006342908.19e-84PREDICTED: ethylene-responsive transcription factor RAP2-12-like isoform X1
TrEMBLE3VVR19e-93E3VVR1_PETHY; Ethylene-responsive-element-binding factor 2
STRINGPGSC0003DMT4000236093e-83(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14462466
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.21e-18related to AP2 12