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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peinf101Scf01063g02003.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family |
BBR-BPC |
Protein Properties |
Length: 284aa MW: 31427.2 Da PI: 8.2076 |
Description |
BBR-BPC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Scf01063g02003.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GAGA_bind | 308.2 | 2.9e-94 | 1 | 284 | 29 | 301 |
GAGA_bind 29 mssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla....salpvgvqvlsgtksid 109
m+++aerda+irern+al e+k a+aerdma lqrd+alaern a+ erd++++al l++ s++ +++g ++ +g+k++
Peinf101Scf01063g02003.1 1 MAIMAERDAAIRERNMALEERKRAFAERDMAMLQRDAALAERNSAIQERDDAIAALRLQDSSINdnsmVPDSPGNGTENGAKHVY 85
899*****************************************************99998887764444556778888888888 PP
GAGA_bind 110 slqqlse...pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkak...kkkkksekskkkvkkesader.. 186
+ qq + +ed+a++ + +++ + +++ +ke+k++k+ + ++ k ++ ++ ++++++ + ++ +d +
Peinf101Scf01063g02003.1 86 NQQQFADvghGSMEDPAAGYLKGTDTSEAKNPKKVRRSKESKQSKQAKIPRLSKIGAESlnmQVISTTSDDWVNLQEMDSD-Keg 169
777744444488888888855544444444455555555555555555555444443333223333333333333322222.133 PP
GAGA_bind 187 .skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLe 270
++++k +l+ln++++Des++PvPvCsCtG+++ CYkWG GGWqSaCCtttiS+yPLP+ +++r +R++grKmS+gaf+klL+
Peinf101Scf01063g02003.1 170 dPHTSWK-DNLGLNQINFDESAMPVPVCSCTGTPQPCYKWGHGGWQSACCTTTISMYPLPQISNKRYSRVGGRKMSGGAFSKLLN 253
3555665.58*************************************************************************** PP
GAGA_bind 271 kLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
+Laa+Gydls p+DLkdhWAkHGtn++ t++
Peinf101Scf01063g02003.1 254 RLAAQGYDLSVPLDLKDHWAKHGTNRYSTLK 284
***************************9986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 284 aa
Download sequence Send
to blast |
MAIMAERDAA IRERNMALEE RKRAFAERDM AMLQRDAALA ERNSAIQERD DAIAALRLQD 60 SSINDNSMVP DSPGNGTENG AKHVYNQQQF ADVGHGSMED PAAGYLKGTD TSEAKNPKKV 120 RRSKESKQSK QAKIPRLSKI GAESLNMQVI STTSDDWVNL QEMDSDKEGD PHTSWKDNLG 180 LNQINFDESA MPVPVCSCTG TPQPCYKWGH GGWQSACCTT TISMYPLPQI SNKRYSRVGG 240 RKMSGGAFSK LLNRLAAQGY DLSVPLDLKD HWAKHGTNRY STLK
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FJ982301 | 0.0 | FJ982301.1 Nicotiana tabacum GAGA-binding transcriptional activator (BBR/BPC2) mRNA, complete cds. |