PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01047g10010.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 432aa    MW: 47238.4 Da    PI: 6.111
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01047g10010.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.71.9e-20202251255
                       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                               +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  Peinf101Scf01047g10010.1 202 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 251
                               7********.**********7.....337*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.8E-36202265IPR001471AP2/ERF domain
SuperFamilySSF541712.16E-22202260IPR016177DNA-binding domain
PfamPF008473.8E-14202251IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-32202260IPR001471AP2/ERF domain
PROSITE profilePS5103225.712202259IPR001471AP2/ERF domain
PRINTSPR003671.2E-11203214IPR001471AP2/ERF domain
CDDcd000185.33E-15210261No hitNo description
PRINTSPR003671.2E-11225241IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MCLLKVANQG ESGEYVRYSE AGDSETTTTS TTAAATTTTA ISQPNESQSF EEMIQQQIQE  60
ETEYLMSSSA TPMFSGYSQT REMSAMVTAL THVVSGRRPG DWSYGGGGGS SPQTSTYSSS  120
SSGSWAGQKR RRDQEEISVT AAEQVQRVYG GFGESSSSVK PEEATSVMVA PPPTTTISTT  180
TTTAAQPAGE VGGEETGERR RRYRGVRQRP WGKWAAEIRD PHKAARVWLG TFDTAEAAAR  240
AYDEAALRFR GNRAKLNFPE NARLLPQQQQ QQQQQRQQQT ASSVVSQLPL MAPITTPPFF  300
QSYNQPQQQQ QPPFQSSEMV RDYWEYSQLL QDPGDFHGQQ QQQQSSSLLE QMFLSSSLGV  360
LHSHTFPSSS SSALGNTSAA SSTSYPLFLS AQQSPFFRPQ THQHNQGGSS SSSNFPGPFW  420
TSSSHYPPSS SS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A8e-23201259160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1197202ERRRRY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006363442.11e-147PREDICTED: ethylene-responsive transcription factor ABR1-like
TrEMBLM1A7F41e-146M1A7F4_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000163061e-147(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43222140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64750.12e-16ERF family protein