PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf01046g21001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | ERF | ||||||||
Protein Properties | Length: 124aa MW: 13770.1 Da PI: 5.2171 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 44.3 | 4.4e-14 | 2 | 44 | 10 | 55 |
AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +k+g+WvAeIr+p +kr r++lg++ ++ Aa+a++ a +l+g Peinf101Scf01046g21001.1 2 RKWGKWVAEIREP---NKRSRIWLGSYSSPVAAARAYDTAVFYLRG 44 46**********9...336*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 6.7E-29 | 1 | 58 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.33E-24 | 1 | 54 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 3.3E-25 | 1 | 54 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.993 | 1 | 52 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.6E-8 | 2 | 44 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 8.5E-18 | 2 | 54 | IPR016177 | DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 124 aa Download sequence Send to blast |
MRKWGKWVAE IREPNKRSRI WLGSYSSPVA AARAYDTAVF YLRGPSARLN FPESIVRDDD 60 HIQDLSSAAI RKKATEVGAK VDALESALHA SSSSTESNLT CSNSNTYSVD LNEYPNPESC 120 EEDN |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015071928.1 | 2e-63 | ethylene-responsive transcription factor ERF010 | ||||
Swissprot | O22174 | 1e-44 | ERF08_ARATH; Ethylene-responsive transcription factor ERF008 | ||||
TrEMBL | A0A1S3YKB5 | 2e-61 | A0A1S3YKB5_TOBAC; ethylene-responsive transcription factor ERF010-like | ||||
TrEMBL | A0A1U7XW50 | 2e-61 | A0A1U7XW50_NICSY; ethylene-responsive transcription factor ERF010-like | ||||
STRING | XP_009796242.1 | 4e-62 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA943 | 23 | 90 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50260.1 | 2e-42 | cooperatively regulated by ethylene and jasmonate 1 |
Publications ? help Back to Top | |||
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