PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01035g04001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 255aa    MW: 28780.9 Da    PI: 4.6268
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01035g04001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.85.9e-091445132
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                              +g W++eEde+l ++++++G g+W+++++   
  Peinf101Scf01035g04001.1 14 KGLWSPEEDEKLCNYITKFGVGSWSSVPKLAD 45
                              678************************99865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.6E-12643IPR009057Homeodomain-like
SuperFamilySSF466896.03E-8844IPR009057Homeodomain-like
PROSITE profilePS512949.472963IPR017930Myb domain
PfamPF002491.7E-61444IPR001005SANT/Myb domain
CDDcd001674.91E-51749No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MGRHACCVKQ KLRKGLWSPE EDEKLCNYIT KFGVGSWSSV PKLADKTSML QMPHLNGLPS  60
AEMDQTFHTT NRSFNTEAKN GHLTEASKED QFVSKQVFDI MFLHGFQSNV NPSGYDSEVL  120
AQYQQIIRPY DHPSEFEENP NYGICSETSL TKFEHGQTTE TDFASSSSSR MSSSNSSNNC  180
GYQNNATGIR INGMLEINET LSWDVENKME SIFQYPYIEI KNEEIKQSPG DFSNCPLSCL  240
TEELCGANLD VFQQI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016487611.14e-80PREDICTED: transcription factor MYB32-like
TrEMBLA0A1S4BFJ79e-79A0A1S4BFJ7_TOBAC; transcription factor MYB32-like
STRINGXP_009598410.19e-79(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01680.21e-20myb domain protein 55