PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00974g17007.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family HD-ZIP
Protein Properties Length: 273aa    MW: 31108.4 Da    PI: 5.7938
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00974g17007.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox53.73.5e-1779132356
                               --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                  Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                               k+++++ eq+++Le+ Fe  +++  e++ +LA+ lgL+ rq+ +WFqNrRa+ k
  Peinf101Scf00974g17007.1  79 KKRRLNLEQVKALERSFELGNKLEPERKIQLARALGLQPRQIAIWFQNRRARCK 132
                               4557899*********************************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.45E-1872136IPR009057Homeodomain-like
SMARTSM003893.4E-1877138IPR001356Homeobox domain
PROSITE profilePS5007116.08278134IPR001356Homeobox domain
CDDcd000862.05E-1679135No hitNo description
PfamPF000462.2E-1479132IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.604.3E-1881141IPR009057Homeodomain-like
PRINTSPR000311.5E-5105114IPR000047Helix-turn-helix motif
PROSITE patternPS000270109132IPR017970Homeobox, conserved site
PRINTSPR000311.5E-5114130IPR000047Helix-turn-helix motif
PfamPF021831.4E-14134172IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MLSRGTGTMA FLPAGPESSV DFRSHEDNDL TSTFPSVFPS SCAPPHQDFH ERCDDHHQDS  60
RADHDEMSDD GSSHLLGEKK RRLNLEQVKA LERSFELGNK LEPERKIQLA RALGLQPRQI  120
AIWFQNRRAR CKTKQLEKDY DILKRQYDKL KVDNDALKSQ NKKLHSELQL LTLGNKESAA  180
DGTPILFNLN KENEGSNWNN NGSVDDNSTV IDVNLGTTTR TSSTNSPLNN HDVFPTTYKI  240
DQTTVPEEGF CNMFTTVEDQ TNYWPLPVQQ HFY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126134RRARCKTKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016490250.11e-138PREDICTED: homeobox-leucine zipper protein HAT7-like isoform X1
RefseqXP_019258561.11e-138PREDICTED: homeobox-leucine zipper protein HAT7-like isoform X1
SwissprotQ004661e-63HAT7_ARATH; Homeobox-leucine zipper protein HAT7
TrEMBLA0A1S4BN141e-137A0A1S4BN14_TOBAC; homeobox-leucine zipper protein HAT7-like isoform X1
TrEMBLA0A314LFK71e-137A0A314LFK7_NICAT; Homeobox-leucine zipper protein hat7
STRINGXP_009775432.11e-137(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8482498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15150.14e-61homeobox 3