PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00973g06006.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

NAC

Protein Properties

Length: 293aa MW: 33080.3 Da PI: 8.3353

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00973g06006.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	95.4	8.6e-30	9	82	54	128
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +e+ewyfF++rd+ky++g+r+nra+ gyWkatg dk++++ k+ +vg +k Lvfy+g+ +kgekt+W+mheyr+ Peinf101Scf00973g06006.1 9 GENEWYFFTPRDRKYRNGTRPNRAAGIGYWKATGADKSIKH-KSVTVGFRKALVFYEGKPQKGEKTNWIMHEYRV 82 689************************************.999**************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	39.023	1	108	IPR003441	NAC domain
SuperFamily	SSF101941	1.31E-35	5	108	IPR003441	NAC domain
Pfam	PF02365	1.5E-14	12	82	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence Send to blast
MTETYAMVGE NEWYFFTPRD RKYRNGTRPN RAAGIGYWKA TGADKSIKHK SVTVGFRKAL 60 VFYEGKPQKG EKTNWIMHEY RVNGSCVARK DENDMRLDNW VLCRIYQKMD KSLKRAQREL 120 NSPLIKNYHV GKNCDYEETN DSIGSVSAHK DNIHHTSVDS SVTLVDSYIE GFSKLPADDP 180 YPFHDETKPT YFHMAQPSST WINYVPDYMN DVQWDASDLD AFPSGADLKV LAASGADLKT 240 FAASGANLKL FAAFCKFETF CCFLSKFKSF AASGANLKAF AASGANLKLF DAF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	4e-39	6	114	66	171	NO APICAL MERISTEM PROTEIN
1ut4_B	4e-39	6	114	66	171	NO APICAL MERISTEM PROTEIN
1ut7_A	4e-39	6	114	66	171	NO APICAL MERISTEM PROTEIN
1ut7_B	4e-39	6	114	66	171	NO APICAL MERISTEM PROTEIN
3swm_A	4e-39	6	114	69	174	NAC domain-containing protein 19
3swm_B	4e-39	6	114	69	174	NAC domain-containing protein 19
3swm_C	4e-39	6	114	69	174	NAC domain-containing protein 19
3swm_D	4e-39	6	114	69	174	NAC domain-containing protein 19
3swp_A	4e-39	6	114	69	174	NAC domain-containing protein 19
3swp_B	4e-39	6	114	69	174	NAC domain-containing protein 19
3swp_C	4e-39	6	114	69	174	NAC domain-containing protein 19
3swp_D	4e-39	6	114	69	174	NAC domain-containing protein 19
4dul_A	4e-39	6	114	66	171	NAC domain-containing protein 19
4dul_B	4e-39	6	114	66	171	NAC domain-containing protein 19

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019223878.1	3e-91	PREDICTED: NAC transcription factor 29-like
TrEMBL	A0A314KWQ1	1e-90	A0A314KWQ1_NICAT; Nac domain-containing protein 68
STRING	XP_009769770.1	9e-90	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA746	24	103

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	6e-45	NAC domain containing protein 32