PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00962g03026.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB
Protein Properties Length: 617aa    MW: 69190.8 Da    PI: 8.1158
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00962g03026.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.75.6e-1868111448
                               S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
           Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                               WT+eEd ll ++vk++ g++Wk+Ia++m  gRt+ qc +rwqk+l
  Peinf101Scf00962g03026.1  68 WTEEEDYLLSEVVKRYNGRNWKKIAECMS-GRTDVQCLHRWQKVL 111
                               *****************************.************986 PP
2Myb_DNA-binding60.14.7e-19117163148
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
           Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                               +g+WT+eEd+ +v++v+++G + W++Ia+ ++ gR +kqc++rw+++l
  Peinf101Scf00962g03026.1 117 KGPWTKEEDDVIVELVEKYGCKKWSLIAKSLP-GRIGKQCRERWHNHL 163
                               79******************************.*************97 PP
3Myb_DNA-binding34.54.9e-11169203137
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS
           Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtl 37 
                               r++WT++E++ l+++++ +G++ W+ Iar ++ gR++
  Peinf101Scf00962g03026.1 169 RDAWTEQEELVLLHYHQIYGNK-WADIARFLP-GRCA 203
                               789*******************.*********.**97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.74258111IPR017930Myb domain
SuperFamilySSF466897.18E-1964125IPR009057Homeodomain-like
SMARTSM007179.2E-1464113IPR001005SANT/Myb domain
CDDcd001671.04E-1368111No hitNo description
Gene3DG3DSA:1.10.10.606.6E-2268123IPR009057Homeodomain-like
PfamPF002492.9E-1568111IPR001005SANT/Myb domain
PROSITE profilePS5129431.296112167IPR017930Myb domain
SuperFamilySSF466897.75E-28114202IPR009057Homeodomain-like
SMARTSM007171.0E-16116165IPR001005SANT/Myb domain
PfamPF002497.6E-18117163IPR001005SANT/Myb domain
CDDcd001674.87E-16119163No hitNo description
Gene3DG3DSA:1.10.10.604.5E-28124170IPR009057Homeodomain-like
SMARTSM007175.0E-8168239IPR001005SANT/Myb domain
PROSITE profilePS5129413.113168241IPR017930Myb domain
PfamPF002493.0E-9169203IPR001005SANT/Myb domain
CDDcd001674.05E-7171212No hitNo description
Gene3DG3DSA:1.10.10.602.3E-19171241IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 617 aa     Download sequence    Send to blast
MGLRIYFGYK IMIQVKEEVQ TLDFCGFASC SSFSDSSYEA STSRYSSEPG SSCRRSSGPT  60
KRSSQAGWTE EEDYLLSEVV KRYNGRNWKK IAECMSGRTD VQCLHRWQKV LNPELVKGPW  120
TKEEDDVIVE LVEKYGCKKW SLIAKSLPGR IGKQCRERWH NHLDPTIKRD AWTEQEELVL  180
LHYHQIYGNK WADIARFLPG RCARKFYFFN FLDTFYVFVW SSCRTDNAIK NHWNSSAKKR  240
LSLNIQSEGS PNFSSHEKKL EISKYPLQAQ SVEQTIFSGE QKGVDNAADA CSTDLTIGCT  300
YSAQNALRKD TSLFGACKSS EENVRDLIKP LGGMQFGKAE IIPIGETDKP CHSNFNCTKI  360
LYPLSTSLEF PLDRSHITSL SSSQVEAVHP ATFGRMYETP KRSRHDVFNN PDHDFLSLSL  420
PGITEVHSQG SKRNKSFDMQ SSLDLNQHGC LYYEPPHVKD LMIPLTDENL SSNNIIGGDN  480
GQPFCSTPTS VELTVSGNGS SSPESMLRNS AMSYTKTPSI IRKKTFKFSE AARHSNCTGT  540
TTPMYSFLGD PDRGDSSNLK DRISGCKTSI SGKSLGRRLE YAFDMEWDAS RCRTPVSAAP  600
PCGLSRGAIG ANTMLTP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h88_C5e-62682419159MYB PROTO-ONCOGENE PROTEIN
1h89_C5e-62682419159MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1397402ETPKRS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009761862.10.0PREDICTED: myb-related protein B-like
RefseqXP_009761863.10.0PREDICTED: myb-related protein B-like
RefseqXP_009761864.10.0PREDICTED: myb-related protein B-like
TrEMBLA0A1U7V6420.0A0A1U7V642_NICSY; myb-related protein B-like
STRINGXP_009761862.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA103932025
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32730.16e-75Homeodomain-like protein