PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00961g09034.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family CPP
Protein Properties Length: 589aa    MW: 63924.1 Da    PI: 8.0255
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00961g09034.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR444.5e-14128166241
                       TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 
                               + k+CnCk+s+Clk+YCeCfa+g +C+  C+C +C+N+ e
  Peinf101Scf00961g09034.1 128 KPKQCNCKHSRCLKLYCECFASGIYCDG-CNCANCNNNIE 166
                               5699************************.********976 PP
2TCR50.93.2e-16212251140
                       TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                               k++kgCnCkks ClkkYCeCf+a+  Cse+CkC +CkN e
  Peinf101Scf00961g09034.1 212 KHNKGCNCKKSGCLKKYCECFQANILCSENCKCVECKNFE 251
                               589***********************************65 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011141.4E-14127167IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163436.378128252IPR005172CRC domain
PfamPF036384.4E-11130164IPR005172CRC domain
SMARTSM011141.0E-18212253IPR033467Tesmin/TSO1-like CXC domain
PfamPF036387.7E-13215250IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 589 aa     Download sequence    Send to blast
MEKSEGGDFP PKKEQSEPTT SGHVSMDNST KKLARQLDFT GGSVSAPTTA AAAKPESFKP  60
IQIQQQLIRP QLQKQTQAPQ HIVMMPMQQQ LQTSLLPPHP SIRPSKPESP KARSRQSASE  120
AKDGTPKKPK QCNCKHSRCL KLYCECFASG IYCDGCNCAN CNNNIENEAA RREAIEATLM  180
RNPNAFRPKI ASSPHGAREN REEAGDGLVL AKHNKGCNCK KSGCLKKYCE CFQANILCSE  240
NCKCVECKNF EGSEERQALC HGDHANNNIA HLQQAANAAI TGAVGSSGFG SPPVNKKRKA  300
QDLFFGSMIK DPVHRLGQFQ QTDQINASAP PSSLSSTPGP RVGNAGGLGP SKFTYRSLLA  360
DLIQPQDIKE LCSVLVVYAR EAAKMLADER DASVKQAKCQ SEASIPSSGV EKVMRDDCSS  420
EIQPENIRAD ESTLDGADVS KDRPMSPGTL ALMCDEKDTI FTAPPPPPSN DLASLSYNTS  480
SQPPHEQGMT EIYPELERIV LTQTRDCLKK LITLGEIKGN QNDMNNGLAM TDSRNQHEPF  540
SNGVAKTVPP PPPKTSQMVD PATAAANKSQ FPKVHPPDYN TDVKTNNLK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A2e-3112626110132Protein lin-54 homolog
5fd3_B2e-3112626110132Protein lin-54 homolog
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPlays a role in development of both male and female reproductive tissues. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009595592.10.0PREDICTED: protein tesmin/TSO1-like CXC 5 isoform X1
SwissprotQ9SZD11e-172TCX5_ARATH; Protein tesmin/TSO1-like CXC 5
TrEMBLA0A1U7VWI30.0A0A1U7VWI3_NICSY; protein tesmin/TSO1-like CXC 5 isoform X1
STRINGXP_009766310.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24012455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29000.11e-152Tesmin/TSO1-like CXC domain-containing protein