PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00936g07008.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Nin-like
Protein Properties Length: 932aa    MW: 103778 Da    PI: 5.9223
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00936g07008.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK92.33.7e-29610661152
                    RWP-RK   1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                               aek+i+l+ l++yF++++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++
  Peinf101Scf00936g07008.1 610 AEKTITLQILQQYFAGSLKDAAKSIGVCPTTLKRICRQHGIQRWPSRKIKKV 661
                               589***********************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.314598681IPR003035RWP-RK domain
PfamPF020421.9E-25613661IPR003035RWP-RK domain
SuperFamilySSF542773.43E-22825914No hitNo description
SMARTSM006661.2E-22831914IPR000270PB1 domain
PROSITE profilePS5174524.201831915IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2405.1E-21832910No hitNo description
CDDcd064071.39E-38833914No hitNo description
PfamPF005641.4E-17833912IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 932 aa     Download sequence    Send to blast
MDESVIPSNP LLPAPSDYLM DLDYMDELLL EGCWLETTDG NEFLQHSSST FSAPFDSSFM  60
WPTAIDANNV GFSEILSKDG QQEKQRSSFT ENLSISHCQG LNSAKVQSFG ENINNTMCTS  120
GQSENHLVEA PELNRRWWIG PKASSSVMDR LIWALGCIRD SSRDKGILLQ LWVPINRDGR  180
RLLTTNDQPF LLDLNCPRLA NYREVSVNYQ FPVNEDSKET VGLPGRVFAD KVPEWTPDVR  240
FFRREEYPRV GHAQECDVRG TLAVPVFEQG SRNCLGVIEV VMTTQKIKYR PELESVCKAL  300
EAVDLRTSEV SSTQDAKVCD LSYQAALHEI LEVLKSACET HGLPLAQTWV PCIQQGKGGC  360
RHSEENLIHC VSTEDSACYV ADPHVQGFHE ACSEYHLLRG QGVVGRAFMT NQPCFSADLT  420
SYSKTEYPLS HHAKMFGLHA AVAIRLRSIE TGSSDFVLEF FLPSDCINPD GHKRMLTSLS  480
IIIQNVCRTL RVVTDKELQE ETVSIGDVAN PSVIISSKEV RKHHKEQSET SQERTSWTSC  540
DVEFQESSAV ISAFKDEKPV EKLRTESVEF RHHNDSGSGI GFASNGDHNA SAEGVSRNPG  600
KGGDRRRTKA EKTITLQILQ QYFAGSLKDA AKSIGVCPTT LKRICRQHGI QRWPSRKIKK  660
VGHSLQKIQR VIDSVQGASG TLQIESFYSN FPELASPNVS KLSPFADSKS DEHPKALNTQ  720
QEGCFTSPHV AASKTTSSSG SQSSTSSQCC SSGTKPQSYP LNVAGNEDPM VQEESVDNAV  780
KRVKSEPELH LSSEALKTMP RSQSHAYFAE NPVSEGPLHM KDGPSKSQED APRVKVTHGE  840
EKIRFRMQNS WRYNELLREI TRRFGIDDPS GLHLKYLDDD SEWVLLTCDA DLEECLDICM  900
SSENQMIKLI LVRDSQHHLG SSFGSCSPLL VQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00154DAPTransfer from AT1G20640Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754430.0HG975443.1 Solanum pennellii chromosome ch04, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016506272.10.0PREDICTED: protein NLP5-like
SwissprotQ9LE380.0NLP4_ARATH; Protein NLP4
TrEMBLA0A1S4CYQ50.0A0A1S4CYQ5_TOBAC; protein NLP5-like
STRINGXP_009622679.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15982467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G20640.20.0Nin-like family protein