PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00925g16011.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 619aa    MW: 69870.6 Da    PI: 6.7791
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00925g16011.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.82.5e-10271001796
                               E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                        B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                               ++pk+f++++ ++ +++    l  +sg++Wev++    + g+++l++GW++F +   +++g f++F +dg s f  +v +
  Peinf101Scf00925g16011.1  27 RIPKDFTSRYCKNMQNP--AYLVVPSGEVWEVEV--VHSEGQIWLAEGWQDFTDYYSIDSGYFLMFGYDGFSHF--NVIL 100
                               79********5554454..9999***********..999999**************************987777..5555 PP
2B344.52.8e-141882551788
                               E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
                        B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                               +++ kfa+ + +k+ ++  l+l+ +   +W+vk+  r  +    + +GWk Fv +n+Lk gD++vF++++ +
  Peinf101Scf00925g16011.1 188 SISMKFARMYFLKN-CG-NLVLRVPGRGTWSVKC--RAARADARIYSGWKAFVLDNKLKFGDVCVFEVIKGT 255
                               7999******8884.44.8***************..7777778899*********************88643 PP
3B340.26.2e-13429505486
                               E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                        B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                                + ps+vl   +l+++ kfa+++  + +++ +l+l+ +   sW+vk+i+     +++    W+ Fv++n+Lk+gD++vF+++ 
  Peinf101Scf00925g16011.1 429 FMQPSYVLPPFNLSVSLKFARKYVRE-NCG-DLVLRVPGKGSWSVKCIIGTENAKIF----WEAFVHDNKLKVGDVCVFEVIV 505
                               67899******************543.354.9***************7744444443....*******************763 PP
4B336.21.1e-115516123396
                               -SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                        B3  33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                               + +++l+ +s rsWevk+  + + + + +++GWkeFv +n++k+g  +vF+l+ rs+  ++v +
  Peinf101Scf00925g16011.1 551 HSDVVLQVSSKRSWEVKC--TLGTQNTQFGSGWKEFVLDNNIKVGGDCVFELVIRSKLLFNVII 612
                               44899*************..777777889**********************9977777556655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010196.3E-518104IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.7E-1425104IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.0E-1427111IPR015300DNA-binding pseudobarrel domain
CDDcd100172.40E-827102No hitNo description
PfamPF023622.8E-72799IPR003340B3 DNA binding domain
PROSITE profilePS5086310.91228104IPR003340B3 DNA binding domain
PROSITE profilePS5086311.11172266IPR003340B3 DNA binding domain
CDDcd100172.86E-16177264No hitNo description
SMARTSM010193.9E-8180266IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.4E-16186263IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.94E-15187263IPR015300DNA-binding pseudobarrel domain
PfamPF023621.1E-11188255IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.103.4E-17418515IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019367.85E-15419516IPR015300DNA-binding pseudobarrel domain
CDDcd100171.80E-15424516No hitNo description
SMARTSM010194.6E-10426518IPR003340B3 DNA binding domain
PROSITE profilePS508639.474426518IPR003340B3 DNA binding domain
PfamPF023621.0E-10428504IPR003340B3 DNA binding domain
SMARTSM010190.006527616IPR003340B3 DNA binding domain
CDDcd100175.43E-11534614No hitNo description
Gene3DG3DSA:2.40.330.102.8E-13535613IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019369.81E-13536613IPR015300DNA-binding pseudobarrel domain
PfamPF023621.4E-9550613IPR003340B3 DNA binding domain
PROSITE profilePS5086310.898554616IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 619 aa     Download sequence    Send to blast
MFEPIFSNNS EPQTHKNYIK NPPLMQRIPK DFTSRYCKNM QNPAYLVVPS GEVWEVEVVH  60
SEGQIWLAEG WQDFTDYYSI DSGYFLMFGY DGFSHFNVIL FDLSASEIEY PYNAVHATRH  120
APKINQIELD DSIEILEDIP QSHRGAKVAD IIDLSAEKIG QCPLGQSSKR RRQEGDSEDD  180
VSVDVQESIS MKFARMYFLK NCGNLVLRVP GRGTWSVKCR AARADARIYS GWKAFVLDNK  240
LKFGDVCVFE VIKGTKLIDV TIFPEAESTP MHKIVGEVPG ISDNSVPCPQ SKTVHTKKLK  300
QQRGNVYGFH SKIEEEYGEG TEIEQSVEIL SHHPLGQGSK RKRLEGEADD DDVSIDICTK  360
SIKVQRSQED VASPSSTRKT KKSGESFQMH SQNSNISCNT NKPVMDKERA IVYQRAKAFK  420
SENPFIISFM QPSYVLPPFN LSVSLKFARK YVRENCGDLV LRVPGKGSWS VKCIIGTENA  480
KIFWEAFVHD NKLKVGDVCV FEVIVGTKLI DVTIFPTAGN TPMHKITEEV PWVSDLSVLC  540
SQCKIFFLTR HSDVVLQVSS KRSWEVKCTL GTQNTQFGSG WKEFVLDNNI KVGGDCVFEL  600
VIRSKLLFNV IIFPAVEDT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016488301.10.0PREDICTED: putative B3 domain-containing protein Os03g0621600 isoform X2
TrEMBLA0A1S4BHH20.0A0A1S4BHH2_TOBAC; putative B3 domain-containing protein Os03g0621600 isoform X2
STRINGXP_009613656.11e-141(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7591893
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-19B3 family protein