PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00889g12034.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ARR-B
Protein Properties Length: 576aa    MW: 63887.7 Da    PI: 6.1315
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00889g12034.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like76.73e-24190243155
                   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                               k+r++Wt +LH++Fv+av+q+ G +k  Pk+il+lm v+ Lt+e+v+SHLQkYRl
  Peinf101Scf00889g12034.1 190 KARVVWTVDLHQKFVKAVNQI-GFDKVGPKKILDLMAVPWLTRENVASHLQKYRL 243
                               68*******************.9*******************************8 PP
2Response_reg81.92.1e-27161241109
                               EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTH CS
              Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgee 83 
                               vl+vdD+p+ +++l+++l+k  y ev+++  ++eal+ll+e++  +D+++ D++mp+mdG++ll++   e  +lp+i+++  ge 
  Peinf101Scf00889g12034.1  16 VLVVDDDPTWLKILEKMLKKCSY-EVTTCGLAREALHLLRERKdgFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGET 98 
                               89*********************.***************999999**********************6644.8************ PP

                               HHHHHHHHTTESEEEESS--HHHHHH CS
              Response_reg  84 edalealkaGakdflsKpfdpeelvk 109
                               + + + ++ Ga d+l Kp+ ++el++
  Peinf101Scf00889g12034.1  99 SRVMKGVQHGACDYLLKPIRMKELRN 124
                               ***********************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23007.4E-4513137No hitNo description
SuperFamilySSF521723.98E-3613137IPR011006CheY-like superfamily
SMARTSM004481.8E-3214126IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011044.01215130IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.6E-2416125IPR001789Signal transduction response regulator, receiver domain
CDDcd001563.19E-3117130No hitNo description
SuperFamilySSF466892.15E-17187245IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.3E-27189247IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-21190243IPR006447Myb domain, plants
PfamPF002496.5E-7192242IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0009735Biological Processresponse to cytokinin
GO:0010082Biological Processregulation of root meristem growth
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 576 aa     Download sequence    Send to blast
MENSKNITGF PAGLRVLVVD DDPTWLKILE KMLKKCSYEV TTCGLAREAL HLLRERKDGF  60
DIVISDVNMP DMDGFKLLEH VGLEMDLPVI MMSVDGETSR VMKGVQHGAC DYLLKPIRMK  120
ELRNIWQHVL RKKMQEVRDI GSLEVDQCDE VWMLNANEVL SGKKRKEFDY KHDEKATSDS  180
RCIDSSCMKK ARVVWTVDLH QKFVKAVNQI GFDKVGPKKI LDLMAVPWLT RENVASHLQK  240
YRLYLIRLQK EDEVKASFCG VKHPDVSLIE TSSSLSLQNP VDVCTDVSND KCGGVSGDKA  300
IVQNGKSNKH ESKVNGVVSM PVAEPSSVVG DNFDAQTAGS KINMNNSFGL VTDVKSAKVT  360
TPYCFTGEAR QPQYKQDFEP HFESPNELSH QPLPGLPHQL PVDCTRPTGF VNILPSREEK  420
ERPSGTENKA SFYKSRSTRV GKVSPVESTV NLFSFQPVGH PTNFHALGQI PSTTWSTTSH  480
SVDQILVNGL QSSQGNLTSG SGAVVASAGE DMCEGSIQGE CFPAYTGLRI VEPFGYNDPQ  540
ALSGVPTCLY DTLRFDYEYP IDSLEGTVLD QGLFIV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A1e-16186248163ARR10-B
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00010PBMTransfer from AT1G67710Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006341767.10.0PREDICTED: two-component response regulator ARR11 isoform X1
RefseqXP_006341768.10.0PREDICTED: two-component response regulator ARR11 isoform X2
TrEMBLA0A0V0IG200.0A0A0V0IG20_SOLCH; Putative two-component response regulator ARR11-like
STRINGPGSC0003DMT4000312600.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67882433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.11e-116response regulator 11