PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00871g09019.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 296aa    MW: 33594.7 Da    PI: 4.9047
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00871g09019.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.45.4e-138841698
                              EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                        B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                               ++p +fa+++ ++   ++ + le ++g+ Wev++   ++ ++++l+kGW++F +   +  g f++F ++grs+f  +v++f+
  Peinf101Scf00871g09019.1  8 QSIPVDFASRYCKN--IQTPVYLEVPDGEIWEVEV--VQSESQIWLAKGWQDFSDYYSISYGHFLMFGYNGRSDF--NVTIFD 84
                              58*********544..4456***************..999999********************************..999987 PP

2B334.63.4e-11206292297
                               EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                        B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                               f   +++++ + + l++pk  a++    ++++  l+++ ++ rsW++k+  + +++        k+Fv +n++k+gD++vF+ + 
  Peinf101Scf00871g09019.1 206 FICSMRPSYVSGASLTIPKAIASKLF--PARHNYLVVQVPNKRSWDLKC--TVGPKN-----AKKKFVLDNNIKVGDVCVFEQVT 281
                               45555666666677********9986..557779***************..666643.....459*****************887 PP

                               SSEE..EEEEE CS
                        B3  87 rsefelvvkvf 97 
                               rse +++v +f
  Peinf101Scf00871g09019.1 282 RSELSFNVIIF 292
                               78888888777 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086312.464186IPR003340B3 DNA binding domain
SMARTSM010190.0015686IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.7E-16686IPR015300DNA-binding pseudobarrel domain
PfamPF023621.5E-9884IPR003340B3 DNA binding domain
SuperFamilySSF1019362.55E-16993IPR015300DNA-binding pseudobarrel domain
CDDcd100171.73E-11984No hitNo description
Gene3DG3DSA:2.40.330.106.9E-17198292IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.59E-16199293IPR015300DNA-binding pseudobarrel domain
CDDcd100172.12E-16204293No hitNo description
PfamPF023628.6E-10205293IPR003340B3 DNA binding domain
PROSITE profilePS508636.908205295IPR003340B3 DNA binding domain
SMARTSM010197.2E-9206295IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MSTTEYEQSI PVDFASRYCK NIQTPVYLEV PDGEIWEVEV VQSESQIWLA KGWQDFSDYY  60
SISYGHFLMF GYNGRSDFNV TIFDLSASEI EYPYNAAHDT RLAQESDQIE FHDFIEISDG  120
ARRRQEEEAD DDVSIEINTK GIMVEEPQEN EASPSSARKT KKSRGSCRAL KQQSKIVSAK  180
SEMVMEKESA TAYQRAKAFT SDNPFFICSM RPSYVSGASL TIPKAIASKL FPARHNYLVV  240
QVPNKRSWDL KCTVGPKNAK KKFVLDNNIK VGDVCVFEQV TRSELSFNVI IFPAAE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016490759.12e-93PREDICTED: B3 domain-containing protein LOC_Os12g40080-like isoform X1
RefseqXP_019230776.11e-93PREDICTED: uncharacterized protein LOC109211655 isoform X2
RefseqXP_019230791.19e-95PREDICTED: B3 domain-containing transcription factor VRN1-like isoform X4
TrEMBLA0A1S4BPE84e-92A0A1S4BPE8_TOBAC; B3 domain-containing protein LOC_Os12g40080-like isoform X1
STRINGXP_009613656.11e-91(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7591893
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.18e-35B3 family protein