PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00871g07026.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 533aa    MW: 59721 Da    PI: 8.8283
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00871g07026.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.77.3e-10418465448
                               S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
           Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                               WT  E  +l+d+v+q+G g+W+ I +       +Rt+ ++k++w+++l
  Peinf101Scf00871g07026.1 418 WTVSEVRKLIDGVAQYGVGRWSHIKKLYFsssVHRTPVDLKDKWRNLL 465
                               ***************************999****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129418.016410469IPR017930Myb domain
Gene3DG3DSA:1.10.10.608.9E-14411472IPR009057Homeodomain-like
SMARTSM007171.2E-11414467IPR001005SANT/Myb domain
SuperFamilySSF466891.44E-16417475IPR009057Homeodomain-like
PfamPF002491.1E-7418465IPR001005SANT/Myb domain
CDDcd116605.67E-20418466No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 533 aa     Download sequence    Send to blast
MNQIYKTEPH ADHSSVSGVL CFDEKRVIKG MERESFLYSI DSGSARKREA GINQEVLDLK  60
QSHFGAGKIQ AQNDLSSTCE DYLLDIEFAE SITNLDYGSS KRLLDPILES QIPLSSSDGT  120
DTCGMSYSSG LAVQEAQSQN AMFGLTNSEL HELSPNKCEG QMLLDYNAVK FPTTFTPGDI  180
SNVDDVADFF AEDASSEKMN DSLVDHSALT SKRNSFMSNA TQNERLDVDR ESFDMHESLA  240
AISRPATSQA MNIDAPLTQK RLRKPTRRYI DESSDLNATR PRKKGEVSTP ASKDKLLRVR  300
CQKKTRTESI EADFFPEESS CIAIQVPFAS LGNEECHKRH ASNAIQVPKS HKEVVVLKSH  360
KESAVLKSHK EAAVLKSHKD ATVLKSHKDA TVVDSRDDAG AHKNLDQDGT RRKHHRLWTV  420
SEVRKLIDGV AQYGVGRWSH IKKLYFSSSV HRTPVDLKDK WRNLLKASYL QKQSKTTGKG  480
KHNLSWRPLP KSILHRVSEL ANMHPYPRNQ RCKHSHSPSP PSSPMHTNKN NIQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009605404.10.0PREDICTED: uncharacterized protein LOC104099973 isoform X1
RefseqXP_016452320.10.0PREDICTED: uncharacterized protein LOC107776885 isoform X1
TrEMBLA0A1S3YJN50.0A0A1S3YJN5_TOBAC; uncharacterized protein LOC107776885 isoform X1
STRINGXP_009605404.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA91551723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.11e-30TRF-like 6