PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00792g02019.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family HD-ZIP
Protein Properties Length: 348aa    MW: 38587.6 Da    PI: 8.859
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00792g02019.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.64.2e-18182236256
                               T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                  Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                               rk+ ++tk+q   Lee F+++++++ +++  LAk+l+L  rqV vWFqNrRa+ k
  Peinf101Scf00792g02019.1 182 RKKLRLTKDQSAYLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 236
                               788899***********************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.0E-17164236IPR009057Homeodomain-like
SuperFamilySSF466892.69E-18174239IPR009057Homeodomain-like
PROSITE profilePS5007116.763178238IPR001356Homeobox domain
SMARTSM003897.6E-15180242IPR001356Homeobox domain
PfamPF000461.5E-15182236IPR001356Homeobox domain
CDDcd000864.44E-15182239No hitNo description
PROSITE patternPS000270213236IPR017970Homeobox, conserved site
PfamPF021837.8E-10238272IPR003106Leucine zipper, homeobox-associated
SMARTSM003408.6E-25238281IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MELALSLGGD TPKPSSHEKL IMDNKDLGFC MGLGKRNTCE DHEEKDSKRT NKNSHERKGS  60
SDPAVQLNLL PFSPLPLKQI PFPWLSQNLA AEPGLTNGPG GKALDMNRRP IVAEEAEDGA  120
ELSSPNSNSA VSTFQMDFSI YRNNNNGRLL GKRDHHFEDE RGTSSASKGG VISDEDENGL  180
ARKKLRLTKD QSAYLEESFK EHNTLNPKQK LALAKQLNLR PRQVEVWFQN RRARTKLKQT  240
ELDCEYLKRC CETLTEENRR LQKELQELRA LKSSQPFYMQ LPATTLTMCP SCERVATTTT  300
TTTPAPAVSA ATTTANATAT TNTTLSLAKP KLLRIFPPAQ VHAPQAAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1230238RRARTKLKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009766178.11e-151PREDICTED: homeobox-leucine zipper protein HOX11-like isoform X2
RefseqXP_016464966.11e-151PREDICTED: homeobox-leucine zipper protein HOX11-like isoform X1
SwissprotP466656e-87HAT14_ARATH; Homeobox-leucine zipper protein HAT14
TrEMBLA0A1S3ZKR31e-150A0A1S3ZKR3_TOBAC; homeobox-leucine zipper protein HOX11-like isoform X1
TrEMBLA0A1U7VIL11e-150A0A1U7VIL1_NICSY; homeobox-leucine zipper protein HOX11-like isoform X2
STRINGXP_009766177.11e-147(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29024186
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.11e-71homeobox from Arabidopsis thaliana