PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00784g02018.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 200aa    MW: 21919.4 Da    PI: 5.3518
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00784g02018.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.73e-091443130
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIart 30
                              +g+WT++Ed++l++++++ G g+W++ ++ 
  Peinf101Scf00784g02018.1 14 KGPWTPDEDDKLIEYINKNGHGSWRSLPKL 43
                              79***********************99886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.7E-13545IPR009057Homeodomain-like
PROSITE profilePS512949.598953IPR017930Myb domain
SuperFamilySSF466892.08E-81151IPR009057Homeodomain-like
PfamPF002494.7E-81443IPR001005SANT/Myb domain
CDDcd001672.18E-51642No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MGRRPCCEKK GLKKGPWTPD EDDKLIEYIN KNGHGSWRSL PKLAAEARLS RESQLLVPSP  60
VGRSETDYFL RIWNSEIGDA FRKFKKGAKT ACHSPASQAS SCTKYGSASG IKTEVELRVA  120
GSPVTGSNQT EFAEWKNDQP HTEDILQGSD ASSSDAIEDS SESALQLLLD FPSNNDMSFL  180
GQSDSYSMYP FLTASSLICP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006339543.17e-86PREDICTED: myb-related protein Zm38-like
TrEMBLM0ZG362e-84M0ZG36_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000000943e-85(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.13e-21myb domain protein 93