PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00782g13022.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family G2-like
Protein Properties Length: 336aa    MW: 38069.5 Da    PI: 9.261
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00782g13022.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.84.3e-3263116255
                   G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                               prlrWtp+LH rFv+ave+LGG+++AtPk +l++m++kgL ++hvkSHLQ+YR+
  Peinf101Scf00782g13022.1  63 PRLRWTPDLHLRFVHAVERLGGQDRATPKLVLQMMNIKGLNIAHVKSHLQMYRS 116
                               8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.40359119IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.5E-3059117IPR009057Homeodomain-like
SuperFamilySSF466898.78E-1561117IPR009057Homeodomain-like
TIGRFAMsTIGR015572.8E-2263118IPR006447Myb domain, plants
PfamPF002495.1E-964115IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MEDSGETGCN YSKTSSTTGK NEDEEDLNAS SKIKDRGSSS NSTVEEESEK KHSVRPYVRS  60
KMPRLRWTPD LHLRFVHAVE RLGGQDRATP KLVLQMMNIK GLNIAHVKSH LQMYRSKKLD  120
DQGQAIAHHR IFMEGGDPNI YNLSQLPMLP TFHQRLNSTF RYSHGNWTRQ GFYTTLTERI  180
FGNNHGREAN QDLYTRIPSF ISERSTSQTN EIKDEMGIFH IAAKAQARAT CHGKGSFIPP  240
DLERTKNLQK LITPLKRKVS KYCDLDLNLS LAVKPRNEEI INHDDNNDDN DNVSSLSLSL  300
SSPMSSSRVT RFKLEDASNS TTENSRRGAS TLDLTL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A9e-1764118458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B9e-1764118458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A7e-1764118357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B7e-1764118357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C7e-1764118357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D7e-1764118357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A9e-1764118458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C9e-1764118458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D9e-1764118458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F9e-1764118458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H9e-1764118458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J9e-1764118458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00297DAPTransfer from AT2G38300Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009621839.11e-154PREDICTED: uncharacterized protein LOC104113394
RefseqXP_009621844.11e-154PREDICTED: uncharacterized protein LOC104113394
RefseqXP_016503328.11e-154PREDICTED: uncharacterized protein LOC107821409
RefseqXP_016503329.11e-154PREDICTED: uncharacterized protein LOC107821409
TrEMBLA0A1S4CQR01e-153A0A1S4CQR0_TOBAC; uncharacterized protein LOC107821409
STRINGXP_009621839.11e-154(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43822141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.12e-54G2-like family protein