PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00778g09015.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 331aa    MW: 38359 Da    PI: 4.9443
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00778g09015.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3383e-1248131183
                               EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
                        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                               f k+l   dv++s  +++ k+ ae+h   + + +sk+l +ed++g+ +++++ +r + g y++++GW+++ ++++L   D +  +
  Peinf101Scf00778g09015.1  48 FTKILCETDVGESFSVSILKEDAEDHlpHLAPGKSKMLEFEDTRGNNFSMEF-VRSNLGDYYFSTGWERYRDEHKLGYDDLLSVY 131
                               8999************************889999******************.7899999*****************99998877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.108.9E-1545136IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019367.85E-1346132IPR015300DNA-binding pseudobarrel domain
PfamPF023621.9E-948131IPR003340B3 DNA binding domain
CDDcd100178.62E-1148135No hitNo description
Gene3DG3DSA:2.40.330.109.7E-5180277IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.9E-5192277IPR015300DNA-binding pseudobarrel domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MTKRQLNEEE GESADSHVSK KQNPTPVSTS REKKTQENTR NDYVKLVFTK ILCETDVGES  60
FSVSILKEDA EDHLPHLAPG KSKMLEFEDT RGNNFSMEFV RSNLGDYYFS TGWERYRDEH  120
KLGYDDLLSV YKKEKQNGVD DDHRYFYIIE CQKVTPQHPT KLFLTHVEFV LAKLLAALED  180
PKSSVEKETV LAKLLCDQDL YGNSKGLKLQ KNEVEENLNE RPLARVGGKI TLPLFDPIEK  240
KLFQMELVYT DEEEYYIGFG WKEYAAEHNL LTFDTIFVNK IIVNRDVVNH RSAKFIWDKD  300
IDDDQLVNNS YYYEIIYQKV SSPPSSTSAT G
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009799396.11e-108PREDICTED: uncharacterized protein LOC104245480
TrEMBLA0A314L7501e-109A0A314L750_NICAT; Uncharacterized protein
STRINGXP_009799396.11e-108(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1631025
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.22e-06related to ABI3/VP1 2