PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00736g27002.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family GRF
Protein Properties Length: 543aa    MW: 58787.3 Da    PI: 8.6088
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00736g27002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC77.31.5e-24156200145
                       WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                               d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e 
  Peinf101Scf00736g27002.1 156 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKPVEG 200
                               79****************************************985 PP
2QLQ63.26.8e-2288124137
                       QLQ   1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 
                               ++FT++Q+++L++Q+l+yKy++an+P+Pp+Ll +i+k
  Peinf101Scf00736g27002.1  88 GPFTPSQWMELEHQALIYKYIVANVPIPPYLLNPIRK 124
                               59*********************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009511.1E-1288124IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166624.8189124IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088802.4E-1689123IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166725.663156200IPR014977WRC domain
PfamPF088796.3E-21157199IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    Send to blast
MDFGLDSGGG VICSDNSNMF TSVETKQKLY GSVGLYKHER STEDEYWNNK DNKLAKISPL  60
LMRSTNESCG SGGMNAGNMH GVIAGIKGPF TPSQWMELEH QALIYKYIVA NVPIPPYLLN  120
PIRKALESAG FSTLAGLRPN AFGWGAFHLG FSNSNDPEPG RCRRTDGKKW RCSRDAVADQ  180
KYCERHMNRG RHRSRKPVEG QTGNSASGNT SATSAKLMNI SSSASAALAP GGAASNTLGL  240
SHNHQLSNLQ PAGTNPSTTS TFLERSYTAK ENFGERYSDT KGPTIVSPSV KESQYSTQKE  300
HNLYGETSRA EFGLVCADSL INPLNKNSSL VNCRGYGNSG SISDQERKSQ HHPLRQFMDD  360
WPKNQSDQSN VSWPKIDLQS DRTQLSISIP VVTSDFMSST SSPVNDKLTA SPHRLSREHE  420
ATQMGLGIGT IVSEHNQRQG SWIPITWESS MGGPLGEVLH STNSSSSDCK NKSALNLMTE  480
GWDRSPRMLS SPTGVLQKAS FGSLSNSSAG SSPRAENSKT MNEGSSLCNG LGTILMNPTL  540
PAM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001311867.10.0growth-regulating factor 1-like
TrEMBLA0A2G3CPI70.0A0A2G3CPI7_CAPCH; Uncharacterized protein
STRINGSolyc04g077510.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16882357
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22840.18e-89growth-regulating factor 1