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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peinf101Scf00724g00020.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family |
GATA |
Protein Properties |
Length: 539aa MW: 60182.8 Da PI: 7.9815 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Scf00724g00020.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 49.4 | 6.1e-16 | 7 | 41 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+
Peinf101Scf00724g00020.1 7 CYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGT 41
****************66666***********997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 539 aa
Download sequence Send
to blast |
MGKHGPCYHC GVTSTPLWRN GPPEKPILCN ACGSRWRTKG TLANYTPLHA RAEPDDFEDY 60 RVSRVKNMSL KNKEAKLLKR KLNHGTTEVR TPPDYYQGFL KGFDEDTSNR SSSGSAISNS 120 ESYAQFGSTE ASDLTGPAQS NIWDATVPSR KRTCVSRPKQ SSVEKLTKDL YTILHEQQSS 180 YFSGSSEEDL LFESDKPMVS VEIGHGSVLI RHPNSISREE ESEASSLSVD NKRHCINESY 240 SRLTTPHVNI NKGVYLPNLG TERTKKPTSQ GMEQNQIKRD KDHLEKLQIL GHHKSPLCHI 300 DMKDVLNYEE FMRQCSSDEQ QQLLKYLAPV DSCAPPDSLK SMFESSHFEE NLSHFQKLLA 360 EGVFDNSLSG VKIEDSRSLK KLILCYLTKS KWVEKYNLLK DAKCKSSASG YEAGVPSGIG 420 TGHSVNVKRP LERHHPKTAG AMNTMKSPKM MMMMKNSYEQ KELVDNNNSC FRPKSLFASP 480 CNSSPLLDPL HFASESSDQD LLLDVPSNSS FPQAELLQPT SSIAAKASTS SSCIYPHLV
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975445 | 1e-148 | HG975445.1 Solanum pennellii chromosome ch06, complete genome. |