PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00698g02036.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 776aa MW: 85776.5 Da PI: 6.418 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 43 | 7.8e-14 | 51 | 86 | 21 | 56 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +n++p++ +reeLAkklg++ +qVk+W+qNrRa++k Peinf101Scf00698g02036.1 51 ENPHPDEITREELAKKLGMDNKQVKFWYQNRRAQMK 86 699*******************************99 PP | |||||||
2 | Homeobox | 42.3 | 1.3e-13 | 87 | 122 | 21 | 56 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +n+ p+ ++reeLAkklg++ +qVk+W+qNrR+ +k Peinf101Scf00698g02036.1 87 ENPRPDDKTREELAKKLGMDSKQVKFWYQNRRTHMK 122 799*****************************9988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.2E-12 | 44 | 86 | IPR009057 | Homeodomain-like |
CDD | cd00086 | 1.10E-10 | 50 | 86 | No hit | No description |
Pfam | PF00046 | 2.6E-11 | 51 | 86 | IPR001356 | Homeobox domain |
PROSITE profile | PS50071 | 12.633 | 51 | 88 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 6.84E-11 | 51 | 86 | IPR009057 | Homeodomain-like |
PROSITE pattern | PS00027 | 0 | 63 | 86 | IPR017970 | Homeobox, conserved site |
SMART | SM00389 | 6.8E-5 | 79 | 128 | IPR001356 | Homeobox domain |
PROSITE profile | PS50071 | 12.455 | 85 | 124 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.98E-10 | 86 | 125 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 1.1E-12 | 87 | 130 | IPR009057 | Homeodomain-like |
Pfam | PF00046 | 4.6E-11 | 87 | 122 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 1.96E-10 | 87 | 129 | IPR009057 | Homeodomain-like |
PROSITE pattern | PS00027 | 0 | 99 | 122 | IPR017970 | Homeobox, conserved site |
PROSITE profile | PS50848 | 36.635 | 261 | 497 | IPR002913 | START domain |
SuperFamily | SSF55961 | 1.15E-27 | 262 | 492 | No hit | No description |
CDD | cd08875 | 6.92E-100 | 265 | 493 | No hit | No description |
SMART | SM00234 | 5.5E-35 | 270 | 494 | IPR002913 | START domain |
Pfam | PF01852 | 1.4E-43 | 271 | 491 | IPR002913 | START domain |
SuperFamily | SSF55961 | 3.16E-6 | 530 | 751 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0008289 | Molecular Function | lipid binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 776 aa Download sequence Send to blast |
IYVSAFFSVP GSHKPKMAGH SDMSEKGESS NDHVANERPS EDENESSDNL ENPHPDEITR 60 EELAKKLGMD NKQVKFWYQN RRAQMKENPR PDDKTREELA KKLGMDSKQV KFWYQNRRTH 120 MKSQSEKHES GMLKQQNDQL RVEQVTLKKA MSNPVCNRCG SQASLAKIND EERQAKIEHE 180 QLKYEVKRIT LLAEKLSVPF VSLEGSMHSA MENSAVGIGG FGGINSVETQ QPMEFDLNKD 240 PPSPLPVTPP QPTPSLDNVD VSYDKSKLMD LAVAAMNELL KLAEIGEPLW VKSLDGGGET 300 LSLEEYVPAF TPCTGMKPGY FTTEATKASA IVIINSLTLV ETLMDSRRWV EMFSCIVGKT 360 SADDVISSSS VGSWSGTLQM IQTEFQILSD MVPVRKVEFL RFCKQHAEGL WAVVDVSADS 420 VQEGSQPGEI GNCRRLPSGC VIQDMPNGHS KVTWIEHMEY NESVVNHLYR PLIRIGLGFG 480 AQRWMATLQR MSEFMAVMMS PVDATGDQAV VCSSGRRSIA MLAQRMARSF CGGVCATIHK 540 WDPIQVANGE DAKLMVRKNI GDPGELTGVI LTATNTFWLP VKQHRLIEFL LNKEKRSQWD 600 FLTNSDTLQH MAYISKGQNP DNSISVFRAN EDDTNADQNS KLILQDTSSN ATGFLLVYTT 660 VDTSAMKVVM DGGDSSSVAF LPSGISIVPD CFQDFSAATN STGTSHGFSC TGSLVTIGFQ 720 ILANSLPTAK LTSKSVKKVN DLVARTIKGI KAAFKGGRRW RGRESLPCLL LVNPCD |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016449095.1 | 0.0 | PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like | ||||
TrEMBL | A0A1S3YA53 | 0.0 | A0A1S3YA53_TOBAC; homeobox-leucine zipper protein ANTHOCYANINLESS 2-like | ||||
STRING | XP_009771833.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA15318 | 3 | 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61150.1 | 0.0 | homeodomain GLABROUS 1 |