PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00688g01015.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Nin-like
Protein Properties Length: 926aa    MW: 103393 Da    PI: 6.5587
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00688g01015.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK90.31.5e-28611662152
                    RWP-RK   1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                               aek+i+++ l+++F++++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++
  Peinf101Scf00688g01015.1 611 AEKNITVQILQQHFAGSLKDAAKSIGVCPTTLKRICRQHGIQRWPSRKIKKV 662
                               589***********************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151916.574601682IPR003035RWP-RK domain
PfamPF020422.6E-25614662IPR003035RWP-RK domain
SuperFamilySSF542771.42E-21824911No hitNo description
Gene3DG3DSA:3.10.20.2402.4E-20828910No hitNo description
SMARTSM006662.5E-22831915IPR000270PB1 domain
PROSITE profilePS5174522.673831914IPR000270PB1 domain
CDDcd064074.79E-38833910No hitNo description
PfamPF005646.2E-16833910IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 926 aa     Download sequence    Send to blast
MDERLFAPNT FLTTSPFDSF MDLDYMDELL LDDCLLETTD NREFMHHRPS ISNMPLDSSF  60
VWPTLLDTIG VEFSGIPSKS CQQERQRSSF SKNSSISEFQ ELNSAKVQSF GENVSNNMCS  120
SGQVENCLFD AAELSGRRWI GPKASSSVMD RLIQALGYIK NCSKDKDILI QIWVPINSDG  180
TRVLSTNDQP FSLDLNCPRL AHYRQVSVNY QFPANDNSKE IVGLPGRVFL GKVPEWTPDV  240
QFFRREEYSR FEHAQQYDVR GTLAVPVFEK GSRKCLSVIE VVTTTQKIKY SPELENVCKA  300
LEAVDLRSSE VSSTLTAKAC NLTYQAVLSE ILEVMKSACK THGLPLAQTW VPCIQHGKGG  360
CCHSNENLGH CISTEDPAYY VADPQVQGFH EACSEHHLLR GQGIVGNAFM TNQPCFSADL  420
TSYSKTEYPL SHYARMFGLH AAVAIRMRST LTGSSDFILE FFLPPNCRNP EDHRRMLTSL  480
SIIIQHVCQT LRVVTDEELQ EETFSLGEVT TPAAGRFTKE VKKHERNGSI ASSQERTFWT  540
SNHADVQESS SVLSAFQHEK VEVMSKELIE SRHQTSAGSR TGFAFSRNNR SSVDGVSHNL  600
HKTGDRRRMK AEKNITVQIL QQHFAGSLKD AAKSIGVCPT TLKRICRQHG IQRWPSRKIK  660
KVGLSLEKIR RVINSVQGAA GTLQVESFYS NFPELASPNI SRSPFADSKP DYHLEALNSQ  720
SESGIMSPSA VASKSASSSC SQGSSSSQCC STGTQPHPYP SNAEGHVVPV ANEESVNYAV  780
NRVKSDAELD LSGEALNPLP RSQSHVFLAE NPKSTIFSPM KKSLFGSQED APRIKVIHGE  840
EKIRFRMQKD WGYKELMSEI ARRFGVDDPN VYHLKYLDDD SEWVLLTCEA DLEECIDVCW  900
SSQNQTIRLL FLHDSQSNLG SSFGSS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009600534.10.0PREDICTED: protein NLP5-like
RefseqXP_009600535.10.0PREDICTED: protein NLP5-like
RefseqXP_016442216.10.0PREDICTED: protein NLP5-like
RefseqXP_016442217.10.0PREDICTED: protein NLP5-like
RefseqXP_016442218.10.0PREDICTED: protein NLP5-like
TrEMBLA0A1S3XQJ00.0A0A1S3XQJ0_TOBAC; protein NLP5-like
STRINGXP_009600534.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15982467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G20640.20.0Nin-like family protein