PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00665g08033.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

STAT

Protein Properties

Length: 740aa MW: 83501.9 Da PI: 6.2397

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00665g08033.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	187	2.3e-58	219	338	1	120
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfri 85 ldv+l++ +++p++ +vevvasL+yad+ ++v ksdd+eapLL+sydG+e++s+drp+k++ GrasfklkisqLsskcdnrLfri Peinf101Scf00665g08033.1 219 LDVTLMDNFSRPMTEEVEVVASLVYADNEAPVGKSDDDEAPLLTSYDGIEYASSDRPSKVISGRASFKLKISQLSSKCDNRLFRI 303 89********************************************************************************* PP STAT 86 kfeipklkkypfleavskpirCisrsrntrssslt 120 +f+ipk+ kypfl ++s+p+rCisr+rn+r++sl+ Peinf101Scf00665g08033.1 304 RFDIPKMGKYPFLVVLSRPVRCISRNRNVRATSLM 338 ****************************99876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF49899	1.45E-7	10	140	IPR013320	Concanavalin A-like lectin/glucanase domain
SuperFamily	SSF55550	1.9E-8	639	703	IPR000980	SH2 domain
Gene3D	G3DSA:3.30.505.10	2.5E-6	639	704	IPR000980	SH2 domain
PROSITE profile	PS50001	9.885	641	723	IPR000980	SH2 domain

Sequence ? help Back to Top
Protein Sequence Length: 740 aa Download sequence Send to blast
KGEKGIMGFQ DYVFLKDLQV EFKDYEETNG FILCFWFFLN EASTLPSTIL HQEHPDVTAH 60 VPFLLLDEKK RMLLFPLQCS SHLNVTSWRE VTYAASLSEF PTKRWVHIGC EVRHDFLRLY 120 LDGEIVGEKA LTSSINNDLG SDSSRISLTC ISGKDSQLDG YAHSAVLLPI VSSIKGHYVK 180 DPPVQLSIDS SSAYEIEEDT DGVWSIVSGK ASCRRNFSLD VTLMDNFSRP MTEEVEVVAS 240 LVYADNEAPV GKSDDDEAPL LTSYDGIEYA SSDRPSKVIS GRASFKLKIS QLSSKCDNRL 300 FRIRFDIPKM GKYPFLVVLS RPVRCISRNR NVRATSLMLR KSSLGTHLLD GSQSPELEDG 360 SSDLLPCIVR EAKPSPSSKR VKLGQEKLCA NFKDDFVLKQ ANGESKSHSW TSEDNYAYRN 420 ALVARPVIHG GAENFSSDSE NSETTNLVLD DLPSNRDPIS DLAVFKYCLG DLNERRLLLK 480 EMAMTARQEE LAAFGERVSL FSGCSHHRHQ ISISKRLIEE GIKCWNLISN DNDHVLWDTL 540 VCGLQEHFLN TTFGCNRSLT LQVHFFLSKL AYCLKNYFKE LFRDNFALIP SDFSLLRRVA 600 GCQDLVSQDN FEKLWCWLYP VAFTLSQQCI TSLWVSRSPL WIEGFITKEE AESSLRGLGA 660 LQDPGTFVLR FPTSRSWPHP DAGNLVVTYV GSDCNIHHRL LSLDFIYSSG AKGMMVKSMQ 720 DMLLEQPELR RLGRQGHTPF

Sequence ? help Back to Top

Protein Sequence Length: 740 aa Download sequence Send to blast

KGEKGIMGFQ DYVFLKDLQV EFKDYEETNG FILCFWFFLN EASTLPSTIL HQEHPDVTAH  60
VPFLLLDEKK RMLLFPLQCS SHLNVTSWRE VTYAASLSEF PTKRWVHIGC EVRHDFLRLY  120
LDGEIVGEKA LTSSINNDLG SDSSRISLTC ISGKDSQLDG YAHSAVLLPI VSSIKGHYVK  180
DPPVQLSIDS SSAYEIEEDT DGVWSIVSGK ASCRRNFSLD VTLMDNFSRP MTEEVEVVAS  240
LVYADNEAPV GKSDDDEAPL LTSYDGIEYA SSDRPSKVIS GRASFKLKIS QLSSKCDNRL  300
FRIRFDIPKM GKYPFLVVLS RPVRCISRNR NVRATSLMLR KSSLGTHLLD GSQSPELEDG  360
SSDLLPCIVR EAKPSPSSKR VKLGQEKLCA NFKDDFVLKQ ANGESKSHSW TSEDNYAYRN  420
ALVARPVIHG GAENFSSDSE NSETTNLVLD DLPSNRDPIS DLAVFKYCLG DLNERRLLLK  480
EMAMTARQEE LAAFGERVSL FSGCSHHRHQ ISISKRLIEE GIKCWNLISN DNDHVLWDTL  540
VCGLQEHFLN TTFGCNRSLT LQVHFFLSKL AYCLKNYFKE LFRDNFALIP SDFSLLRRVA  600
GCQDLVSQDN FEKLWCWLYP VAFTLSQQCI TSLWVSRSPL WIEGFITKEE AESSLRGLGA  660
LQDPGTFVLR FPTSRSWPHP DAGNLVVTYV GSDCNIHHRL LSLDFIYSSG AKGMMVKSMQ  720
DMLLEQPELR RLGRQGHTPF

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC210354	1e-121	AC210354.1 Solanum lycopersicum cultivar Heinz 1706 chromosome 7 clone C07HBa0102J11, complete sequence.
GenBank	HG975519	1e-121	HG975519.1 Solanum lycopersicum chromosome ch07, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006348345.1	0.0	PREDICTED: uncharacterized protein LOC102592228
TrEMBL	A0A0V0INF7	0.0	A0A0V0INF7_SOLCH; Putative ovule protein
STRING	XP_009769180.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA9394	23	25

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17040.1	0.0	SH2 domain protein A