PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00657g05024.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

C2H2

Protein Properties

Length: 1232aa MW: 135627 Da PI: 4.779

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00657g05024.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16	3.4e-05	441	463	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C +C+ +F++k++L +H+ + H Peinf101Scf00657g05024.1 441 QCDKCNVTFNNKDDLLQHQLSsH 463 8******************9988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF57667	4.24E-5	440	507	No hit	No description
PROSITE profile	PS50157	10.575	440	468	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.0024	440	463	IPR015880	Zinc finger, C2H2-like
PROSITE pattern	PS00028	0	442	463	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.31	485	507	IPR015880	Zinc finger, C2H2-like
PROSITE profile	PS50157	8.808	485	512	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	487	507	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 1232 aa Download sequence Send to blast
MASVTLDPSS TTTITTSGPP PPLLQAESIP TVDLNLLSQS ELYSLSLCSP SAFNPRLRHD 60 DVIIPKIDRS VFNESAGSRK QTYSRLRLAP ASSAPGPGPR SRTPHLRSNF PQTSFQNNAN 120 DPENTQIVSL LKQLFGSGQM NPSNLIPVRV DYSNSVPIPT PVPELDNVGS QKRKRGPGRP 180 RKGEDVVMKD IVVYQNVVDH DRDKDKEIVN KDGERVDLVG LGVMENPFGE ELRKRTEGLG 240 SAEELLGFLE RLNGEWGSTR RKKRIVDASE FGNVLPKGWK LLISVKKKEG RVWLHCRRYI 300 SQKSHLYKET LSNCKLWGGL GVKDLRVFNH YSLWEFETEG TLYGGSPNGR RFDTCKEVSS 360 YLLSLHGERN ENVPAYAKST ETVEITNTCT LVSTSDLRVQ DGGEKESVPF HNSSPAVGPG 420 ELQVLLNFGE LSEVQVGDLL QCDKCNVTFN NKDDLLQHQL SSHRRKRSRN GQSITDGVII 480 KDGKFECQFC HKTFEERRRY NGHVGNHVKY QGKTAADGSL SINVGKCVEP VVSSGAMLTE 540 VIVQDSVASA RDMTENVDVR ADVGNNPAPP SKIEEDRMET DDKLEGRGEA MDTVPNKTNL 600 CLSSEVVTFN NKDNNCCGTL ADSLIVDNVT EGTNKDFHNQ EGSSESCFPI SLTEKTCTNK 660 SNVIVCSIIE EPKQESLLCS NGIVDSCGVS MEDGKFPPML DESKVVTDRF VDNESTNALC 720 SNLGVLDENT LVSAEQVPCA EDYSGNDVSF VAETSRDTRG LKISTGTPSC EEEGSTVDHV 780 QGVLSGSIGE QKPNSTCDIT NDECGSLVDP NDNKLTMKED SCSFVLPPDE HVNIADRDVS 840 DVSVCFLEEP EQRIGDKSSL PSPARENNSG VEAQFFDDLK TTTYEPKISE LQSVGSNKLG 900 FPSGNNHAVQ KADECAIENE KGLALCSFFP ATDKRASHAQ DHDSKVYQST REVNDQQSSA 960 SALFSSTYVP QASTKEYTMN RSYSNPLNFD GLENSRHHDQ NVVFGNSHVD PNLNSTHRNR 1020 YITEKSTFQL SMDGAYVVRD NLHRRLETDR QGEVGVDLSE SAFKGKTGDF ESNFNMVFHS 1080 QSCDGRKVDE VGNSGKKIVT GFGCGNAKTN EDAMAGSIWR TGVENVMQGG SVDNSTSAVQ 1140 SSNCFQTYDV MSDKVQGLFG ENEKYDGTTG FDGLRSDRNE PVEYSFMSTH SLNSLQEEPR 1200 VLPYDVDIDQ GFNSSFWLGK DDLMPNLADR NQ

Sequence ? help Back to Top

Protein Sequence Length: 1232 aa Download sequence Send to blast

MASVTLDPSS TTTITTSGPP PPLLQAESIP TVDLNLLSQS ELYSLSLCSP SAFNPRLRHD  60
DVIIPKIDRS VFNESAGSRK QTYSRLRLAP ASSAPGPGPR SRTPHLRSNF PQTSFQNNAN  120
DPENTQIVSL LKQLFGSGQM NPSNLIPVRV DYSNSVPIPT PVPELDNVGS QKRKRGPGRP  180
RKGEDVVMKD IVVYQNVVDH DRDKDKEIVN KDGERVDLVG LGVMENPFGE ELRKRTEGLG  240
SAEELLGFLE RLNGEWGSTR RKKRIVDASE FGNVLPKGWK LLISVKKKEG RVWLHCRRYI  300
SQKSHLYKET LSNCKLWGGL GVKDLRVFNH YSLWEFETEG TLYGGSPNGR RFDTCKEVSS  360
YLLSLHGERN ENVPAYAKST ETVEITNTCT LVSTSDLRVQ DGGEKESVPF HNSSPAVGPG  420
ELQVLLNFGE LSEVQVGDLL QCDKCNVTFN NKDDLLQHQL SSHRRKRSRN GQSITDGVII  480
KDGKFECQFC HKTFEERRRY NGHVGNHVKY QGKTAADGSL SINVGKCVEP VVSSGAMLTE  540
VIVQDSVASA RDMTENVDVR ADVGNNPAPP SKIEEDRMET DDKLEGRGEA MDTVPNKTNL  600
CLSSEVVTFN NKDNNCCGTL ADSLIVDNVT EGTNKDFHNQ EGSSESCFPI SLTEKTCTNK  660
SNVIVCSIIE EPKQESLLCS NGIVDSCGVS MEDGKFPPML DESKVVTDRF VDNESTNALC  720
SNLGVLDENT LVSAEQVPCA EDYSGNDVSF VAETSRDTRG LKISTGTPSC EEEGSTVDHV  780
QGVLSGSIGE QKPNSTCDIT NDECGSLVDP NDNKLTMKED SCSFVLPPDE HVNIADRDVS  840
DVSVCFLEEP EQRIGDKSSL PSPARENNSG VEAQFFDDLK TTTYEPKISE LQSVGSNKLG  900
FPSGNNHAVQ KADECAIENE KGLALCSFFP ATDKRASHAQ DHDSKVYQST REVNDQQSSA  960
SALFSSTYVP QASTKEYTMN RSYSNPLNFD GLENSRHHDQ NVVFGNSHVD PNLNSTHRNR  1020
YITEKSTFQL SMDGAYVVRD NLHRRLETDR QGEVGVDLSE SAFKGKTGDF ESNFNMVFHS  1080
QSCDGRKVDE VGNSGKKIVT GFGCGNAKTN EDAMAGSIWR TGVENVMQGG SVDNSTSAVQ  1140
SSNCFQTYDV MSDKVQGLFG ENEKYDGTTG FDGLRSDRNE PVEYSFMSTH SLNSLQEEPR  1200
VLPYDVDIDQ GFNSSFWLGK DDLMPNLADR NQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019239819.1	0.0	PREDICTED: uncharacterized protein LOC109219801
TrEMBL	A0A1J6K6Q9	0.0	A0A1J6K6Q9_NICAT; Methyl-cpg-binding domain-containing protein 8
STRING	XP_009613130.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7850	16	19