PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00650g26031.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family CAMTA
Protein Properties Length: 1012aa    MW: 113790 Da    PI: 5.9354
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00650g26031.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1179.15.4e-56201362118
                      CG-1   2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYa 86 
                               l+ ++rwl++ ei++iL n+ k+++t e++ +p sgs++L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+++vl+cyYa
  Peinf101Scf00650g26031.1  20 LEAQNRWLRPAEICEILRNYPKFHITPEPPYKPVSGSVFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYA 104
                               5679********************************************************************************* PP

                      CG-1  87 hseenptfqrrcywlLeeelekivlvhylevk 118
                               h+een +fqrr+yw+Le++l +iv+vhylevk
  Peinf101Scf00650g26031.1 105 HGEENDNFQRRSYWMLEQDLMHIVFVHYLEVK 136
                               *****************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143781.41215141IPR005559CG-1 DNA-binding domain
SMARTSM010761.6E-7818136IPR005559CG-1 DNA-binding domain
PfamPF038597.1E-5021135IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.103.4E-7423514IPR013783Immunoglobulin-like fold
SuperFamilySSF812964.2E-19428514IPR014756Immunoglobulin E-set
PfamPF018332.6E-7428513IPR002909IPT domain
SuperFamilySSF484031.51E-15622722IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.201.3E-15626726IPR020683Ankyrin repeat-containing domain
CDDcd002041.38E-13627720No hitNo description
PROSITE profilePS5029717.82628722IPR020683Ankyrin repeat-containing domain
SMARTSM002480.0023661690IPR002110Ankyrin repeat
PROSITE profilePS500889.484661693IPR002110Ankyrin repeat
SMARTSM002482400700729IPR002110Ankyrin repeat
SMARTSM000151.8833855IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.876834863IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525409.03E-7835884IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF006120.0086836854IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0026856878IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.706857881IPR000048IQ motif, EF-hand binding site
PfamPF006123.0E-4858878IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1012 aa     Download sequence    Send to blast
MANSGSDPTA FRLDIRQILL EAQNRWLRPA EICEILRNYP KFHITPEPPY KPVSGSVFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSIDVLH CYYAHGEEND NFQRRSYWML  120
EQDLMHIVFV HYLEVKGNKA NISYTRSAEP AQSNSLDESS SWDGLPRSQN LTSASPTSTL  180
TLAHDEAESV DYTSIPSRGG GGNCADGSFT SGLQSTMDLG SWEDVFEHCT RGGVSYKQDI  240
QNTSSVQANW QASNRSSFYS SGDSPLQFHG QPINQSLMTD SSYNFINSSV DRNSLPSNVS  300
ETLYLSPSEQ EEQILQMNLQ NLNSHLELQS DADQEITMNI LGHGDYSTTK QPRLGSILKE  360
EGLNKVDSFS RWAAKELEDV EELHVQSSNG ISWNLIDSED DGSCIPSKMQ LYSESLNPSL  420
SQVQLFSIID FSPNWAYSAS ETKVLITGRF LKSEREVAEC KWSCMFGELE VAAEVLTDGL  480
LRCHAPPHKP GIVPFYVTCS NRLACSEVRE FEYRVGPSQE FDAADMLITE MHLLERFQNL  540
LSLGPADSHY NCDNPMAAKE KESMINKIMC LLEEENQHIV KRAAACDTSQ PRVMEDLLLE  600
NQLKERFYAW LVHQVSSDGK RQTVLADEGQ GVLHIAAALG YDWALKPILV SGVSVDFRDV  660
NGWTSLHWAA FYGREKTVVH LVSLGASPGA LTDPSAEFPL GRTPADLASA NGHKGISGFL  720
AESSLTNHLS TLTVADVNEH SASEVSQTEV VETASERLAV PTTGQDVPDV LSFKDSLAAV  780
RNATQAAARI HQIFRVQSFQ RKQIIEHGNN EYDERALSII GAKARRSGQN DGVAQAAALH  840
IQKKFRGWKK RKEFLLIRKR IVKIQALVRG HQVRKKYKPI IWSVGILEKV ILRWRRKGSG  900
LRGFRSEEVT NRPSTHDQPL LEDDYDFLKE GRKQTEVRMQ KALDRVKSMA QYPEARAQYR  960
RLLTAAEGLR EAKQDGPTGI LKNSEDTSYH DEDLFDVEDL LDDDTFMSIA FE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cxk_A2e-13428518993calmodulin binding transcription activator 1
2cxk_B2e-13428518993calmodulin binding transcription activator 1
2cxk_C2e-13428518993calmodulin binding transcription activator 1
2cxk_D2e-13428518993calmodulin binding transcription activator 1
2cxk_E2e-13428518993calmodulin binding transcription activator 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved in freezing tolerance in association with CAMTA1 and CAMTA3. Contributes together with CAMTA1 and CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:23581962). Involved together with CAMTA3 and CAMTA4 in the positive regulation of a general stress response (PubMed:25039701). Involved in tolerance to aluminum. Binds to the promoter of ALMT1 transporter and contributes to the positive regulation of aluminum-induced expression of ALMT1 (PubMed:25627216). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:23581962, ECO:0000269|PubMed:25039701, ECO:0000269|PubMed:25627216, ECO:0000305|PubMed:11925432}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salt, wounding, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by aluminum (PubMed:25627216). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:25627216}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016485864.10.0PREDICTED: calmodulin-binding transcription activator 2-like isoform X1
SwissprotQ6NPP40.0CMTA2_ARATH; Calmodulin-binding transcription activator 2
TrEMBLA0A1S4BAF30.0A0A1S4BAF3_TOBAC; calmodulin-binding transcription activator 2-like isoform X1
STRINGXP_009600617.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22302146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09410.20.0ethylene induced calmodulin binding protein
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]