PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00635g04018.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 436aa    MW: 48398.6 Da    PI: 7.7478
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00635g04018.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.55.9e-1939129199
                               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                               ffkv+   d + s  +++p kfa+  ++    + +  led+sg++W+v+l  +++sg   +++GW +F +++gLk gDf+vF+++
  Peinf101Scf00635g04018.1  39 FFKVM--IDKSFSWVMYFPPKFARLVSHLA--NEETYLEDSSGQRWTVRL--CNRSGPLAIRQGWHKFSSEHGLKMGDFLVFHYI 117
                               78888..788888889*******8775443..3479**************..********************************* PP

                               SSSEE..EEEEE-S CS
                        B3  86 grsefelvvkvfrk 99 
                               + + f  vv++f +
  Peinf101Scf00635g04018.1 118 QGQHF--VVQIFGR 129
                               97888..****987 PP

2B332.91.2e-103564212794
                               ---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                        B3  27 ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                                +kk +++ ++l+ +++r W v +  + +sg  vl++GW  F    gLk gD +vF+l++ se+ ++v
  Peinf101Scf00635g04018.1 356 TKKKLGGILIKLQGPDNRCWLVMY--QERSGCKVLADGWALFTAVYGLKPGDECVFQLVDLSERFFKV 421
                               556778999***************..99999999***********************98764442455 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019361.41E-2334132IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.107.9E-2236132IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086313.45137130IPR003340B3 DNA binding domain
CDDcd100171.81E-2038127No hitNo description
PfamPF023622.6E-1739129IPR003340B3 DNA binding domain
SMARTSM010192.5E-1539130IPR003340B3 DNA binding domain
PROSITE profilePS508639.347329427IPR003340B3 DNA binding domain
SMARTSM010190.063332422IPR003340B3 DNA binding domain
CDDcd100173.89E-9338423No hitNo description
Gene3DG3DSA:2.40.330.103.3E-9342422IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.73E-11342422IPR015300DNA-binding pseudobarrel domain
PfamPF023625.1E-8345421IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MVRARGTVHQ KEACKECTRT CLLIHGQREP DPSPMVSSFF KVMIDKSFSW VMYFPPKFAR  60
LVSHLANEET YLEDSSGQRW TVRLCNRSGP LAIRQGWHKF SSEHGLKMGD FLVFHYIQGQ  120
HFVVQIFGRS GCQKTSFYPD SRKKKKRART DCEATSQDEL LPETDINLRK KQNSTPSVTA  180
VPESEQAVHQ PVTSTLASNI DADSEKQQRV PQAEGTSDAL QGENGPPNNV STNTGSQRES  240
SSGLPVEMEF VTSKTFLHFD DIGTSQTENI SEPVNIVSLL DQKNETGGKG KTPKKVEKDG  300
HGSAMAVNGN NKVIKSGPAD SGDASYPEAA SFSYLLRVDG RSFLELPQSW PNVMVTKKKL  360
GGILIKLQGP DNRCWLVMYQ ERSGCKVLAD GWALFTAVYG LKPGDECVFQ LVDLSERFFK  420
VGIEYKLDVT QATLGD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141146RKKKKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016446640.10.0PREDICTED: B3 domain-containing protein Os01g0905400-like
TrEMBLA0A1S3Y3C90.0A0A1S3Y3C9_TOBAC; B3 domain-containing protein Os01g0905400-like
STRINGSolyc03g007140.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22102352
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.19e-13B3 family protein