PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00635g04018.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | B3 | ||||||||
Protein Properties | Length: 436aa MW: 48398.6 Da PI: 7.7478 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 59.5 | 5.9e-19 | 39 | 129 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 ffkv+ d + s +++p kfa+ ++ + + led+sg++W+v+l +++sg +++GW +F +++gLk gDf+vF+++ Peinf101Scf00635g04018.1 39 FFKVM--IDKSFSWVMYFPPKFARLVSHLA--NEETYLEDSSGQRWTVRL--CNRSGPLAIRQGWHKFSSEHGLKMGDFLVFHYI 117 78888..788888889*******8775443..3479**************..********************************* PP SSSEE..EEEEE-S CS B3 86 grsefelvvkvfrk 99 + + f vv++f + Peinf101Scf00635g04018.1 118 QGQHF--VVQIFGR 129 97888..****987 PP | |||||||
2 | B3 | 32.9 | 1.2e-10 | 356 | 421 | 27 | 94 |
---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 27 ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 +kk +++ ++l+ +++r W v + + +sg vl++GW F gLk gD +vF+l++ se+ ++v Peinf101Scf00635g04018.1 356 TKKKLGGILIKLQGPDNRCWLVMY--QERSGCKVLADGWALFTAVYGLKPGDECVFQLVDLSERFFKV 421 556778999***************..99999999***********************98764442455 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 1.41E-23 | 34 | 132 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 7.9E-22 | 36 | 132 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 13.451 | 37 | 130 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 1.81E-20 | 38 | 127 | No hit | No description |
Pfam | PF02362 | 2.6E-17 | 39 | 129 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 2.5E-15 | 39 | 130 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 9.347 | 329 | 427 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 0.063 | 332 | 422 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 3.89E-9 | 338 | 423 | No hit | No description |
Gene3D | G3DSA:2.40.330.10 | 3.3E-9 | 342 | 422 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 3.73E-11 | 342 | 422 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 5.1E-8 | 345 | 421 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 436 aa Download sequence Send to blast |
MVRARGTVHQ KEACKECTRT CLLIHGQREP DPSPMVSSFF KVMIDKSFSW VMYFPPKFAR 60 LVSHLANEET YLEDSSGQRW TVRLCNRSGP LAIRQGWHKF SSEHGLKMGD FLVFHYIQGQ 120 HFVVQIFGRS GCQKTSFYPD SRKKKKRART DCEATSQDEL LPETDINLRK KQNSTPSVTA 180 VPESEQAVHQ PVTSTLASNI DADSEKQQRV PQAEGTSDAL QGENGPPNNV STNTGSQRES 240 SSGLPVEMEF VTSKTFLHFD DIGTSQTENI SEPVNIVSLL DQKNETGGKG KTPKKVEKDG 300 HGSAMAVNGN NKVIKSGPAD SGDASYPEAA SFSYLLRVDG RSFLELPQSW PNVMVTKKKL 360 GGILIKLQGP DNRCWLVMYQ ERSGCKVLAD GWALFTAVYG LKPGDECVFQ LVDLSERFFK 420 VGIEYKLDVT QATLGD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 141 | 146 | RKKKKR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016446640.1 | 0.0 | PREDICTED: B3 domain-containing protein Os01g0905400-like | ||||
TrEMBL | A0A1S3Y3C9 | 0.0 | A0A1S3Y3C9_TOBAC; B3 domain-containing protein Os01g0905400-like | ||||
STRING | Solyc03g007140.2.1 | 0.0 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2210 | 23 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18960.1 | 9e-13 | B3 family protein |